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Report for CCDS5452.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5452.1 Public Homo sapiens 7 NME8 24 110 108 CCDS HistoryNCBI Gene:51314Re-query CCDS DB by CCDS ID:5452.1Re-query CCDS DB by GeneID:51314See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5452.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000199447.9 ENSP00000199447.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000199447.9Link to Ensembl Protein Viewer:ENSP00000199447.4Re-query CCDS DB by Nucleotide ID:ENST00000199447Re-query CCDS DB by Protein ID:ENSP00000199447
Original member Current member EBI ENST00000440017.5 ENSP00000397063.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000440017.5Link to Ensembl Protein Viewer:ENSP00000397063.1Re-query CCDS DB by Nucleotide ID:ENST00000440017Re-query CCDS DB by Protein ID:ENSP00000397063
Original member Current member NCBI NM_016616.5 NP_057700.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016616.5Link to Protein Sequence:NP_057700.3Re-query CCDS DB by Nucleotide ID:NM_016616Re-query CCDS DB by Protein ID:NP_057700Link to BLAST:NP_057700.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057700.3 588 Q8N427 588 100% 0 0

Chromosomal Locations for CCDS 5452.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 37850267 37850299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37850378 37850435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37850629 37850735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37857274 37857345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37862028 37862144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37863396 37863462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37864348 37864421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37865525 37865617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37867702 37867898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37876832 37877007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37884303 37884447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37885145 37885252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37888277 37888428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37894466 37894610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37896870 37897092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1767 nt):
ATGGCAAGCAAAAAACGAGAAGTCCAGTTACAGACAGTCATCAATAATCAAAGCCTGTGGGATGAGATGT
TG
CAGAACAAAGGCTTAACAGTGATTGATGTTTACCAAGCCTGGTGTGGACCTTGCAGAGCAATGCAACC
T
TTATTCAGAAAATTGAAAAATGAACTGAACGAAGACGAAATTCTGCATTTTGCTGTCGCAGAAGCTGAC
AAC
ATTGTGACTTTGCAGCCATTTAGAGATAAATGTGAACCTGTTTTTCTCTTTAGTGTTAATGGCAAAA
TT
ATCGAAAAGATTCAGGGTGCAAATGCACCGCTTGTTAATAAAAAAGTTATTAATTTGATCGATGAGGA
G
AGAAAAATTGCAGCAGGTGAAATGGCTCGACCTCAGTATCCTGAAATTCCATTAGTAGACTCAGATTCA
GAA
GTTAGTGAAGAATCACCATGTGAAAGTGTTCAGGAATTATACAGTATTGCTATTATCAAACCGGATG
CT
GTGATTAGTAAAAAAGTTCTAGAAATTAAAAGAAAAATTACCAAAGCTGGATTTATTATAGAAGCAGA
G
CATAAGACAGTGCTCACTGAAGAACAAGTTGTCAACTTCTATAGTCGAATAGCAGACCAGTGTGACTTC
GAA
GAGTTTGTCTCTTTTATGACAAGTGGCTTAAGCTATATTCTAGTTGTATCTCAAGGAAGTAAACACA
AT
CCTCCCTCTGAAGAAACCGAACCACAGACTGACACCGAACCTAACGAACGATCTGAGGATCAACCTGA
G
GTCGAAGCCCAGGTTACACCTGGAATGATGAAGAACAAACAAGACAGTTTACAAGAATATCTGGAAAGA
CAA
CATTTAGCTCAGCTCTGTGACATTGAAGAGGATGCAGCTAATGTTGCTAAGTTCATGGATGCTTTCT
TC
CCCGATTTTAAAAAAATGAAAAGCATGAAATTAGAAAAGACATTGGCATTACTTCGACCAAATCTCTT
T
CATGAAAGGAAAGATGATGTTTTGCGTATTATTAAAGATGAAGACTTCAAAATACTGGAGCAAAGACAA
GTA
GTATTATCGGAAAAAGAAGCACAAGCACTGTGCAAGGAATATGAAAATGAAGACTATTTTAATAAAC
TT
ATAGAAAACATGACCAGTGGTCCATCTCTAGCCCTTGTTTTATTGAGAGACAATGGCTTGCAATACTG
G
AAACAATTACTGGGACCAAGAACTGTTGAAGAAGCCATTGAATATTTTCCAGAGAGTTTATGTGCACAG
TTT
GCGATGGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGATTCATTAGAAACCGCTGAAAGGGAAA
TA
CAGCATTTCTTTCCTCTTCAAAGCACTTTAGGCTTGATTAAACCTCATGCAACAAGTGAACAAAGAGA
G
CAGATCCTGAAGATAGTTAAGGAGGCTGGATTTGATCTGACACAGGTGAAGAAAATGTTCCTAACTCCT
GAG
CAAATAGAGAAAATTTATCCAAAAGTAACAGGAAAAGACTTTTATAAAGATTTATTGGAAATGTTAT
CT
GTGGGTCCATCTATGGTCATGATTCTGACCAAGTGGAATGCTGTTGCAGAATGGAGACGATTGATGGG
C
CCAACAGACCCAGAAGAAGCAAAATTACTTTCCCCTGACTCCATCCGAGCCCAGTTTGGAATAAGTAAA
TTG
AAAAACATTGTCCATGGAGCATCTAACGCCTATGAAGCAAAAGAGGTTGTTAATAGACTCTTTGAGG
AT
CCTGAGGAAAACTAA


Translation (588 aa):
MASKKREVQLQTVINNQSLWDEMLQNKGLTVIDVYQAWCGPCRAMQPLFRKLKNELNEDEILHFAVAEAD
N
IVTLQPFRDKCEPVFLFSV
NGKIIEKIQGANAPLVNKKVINLIDEERKIAAGEMARPQYPEIPLVDSDS
E
VSEESPCESV
QELYSIAIIKPDAVISKKVLEIKRKITKAGFIIEAEHKTVLTEEQVVNFYSRIADQCDF
E
EFVSFMTSGLSYILVVSQGSKHNPPSEETEPQTDTEPNERSEDQPEVEAQVTPGMMKNKQD
SLQEYLER
Q
HLAQLCDIEEDAANVAKFMDAFFPDFKKMKSMKLEKTLALLRPNLFHERK
DDVLRIIKDEDFKILEQRQ
V
VLSEKEAQALCKEYENEDYFNKLIENMT
SGPSLALVLLRDNGLQYWKQLLGPRTVEEAIEYFPESLCAQ
F
AMDSLPVNQLYGSDSLETAEREIQHFFPLQSTLGLIKPHATSEQR
EQILKIVKEAGFDLTQVKKMFLTP
E
QIEKIYPKVTGKDFYKDLLEMLS
VGPSMVMILTKWNAVAEWRRLMGPTDPEEAKLLSPDSIRAQFGISK
L
KNIVHGASNAYEAKEVVNRLFEDPEEN




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser