NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9568.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9568.1 Public Homo sapiens 14 ZNF219 24 110 108 CCDS HistoryNCBI Gene:51222Re-query CCDS DB by CCDS ID:9568.1Re-query CCDS DB by GeneID:51222See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9568.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360947.8 ENSP00000354206.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360947.8Link to Ensembl Protein Viewer:ENSP00000354206.3Re-query CCDS DB by Nucleotide ID:ENST00000360947Re-query CCDS DB by Protein ID:ENSP00000354206
Original member Current member EBI ENST00000451119.6 ENSP00000388558.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000451119.6Link to Ensembl Protein Viewer:ENSP00000388558.2Re-query CCDS DB by Nucleotide ID:ENST00000451119Re-query CCDS DB by Protein ID:ENSP00000388558
Original member Current member EBI ENST00000421093.6 ENSP00000392401.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000421093.6Link to Ensembl Protein Viewer:ENSP00000392401.2Re-query CCDS DB by Nucleotide ID:ENST00000421093Re-query CCDS DB by Protein ID:ENSP00000392401
Original member Current member NCBI NM_001101672.2 NP_001095142.1 Accepted alive Link to Nucleotide Sequence:NM_001101672.2Link to Protein Sequence:NP_001095142.1Re-query CCDS DB by Nucleotide ID:NM_001101672Re-query CCDS DB by Protein ID:NP_001095142Link to BLAST:NP_001095142.1
Original member Current member NCBI NM_001102454.2 NP_001095924.1 Accepted alive Link to Nucleotide Sequence:NM_001102454.2Link to Protein Sequence:NP_001095924.1Re-query CCDS DB by Nucleotide ID:NM_001102454Re-query CCDS DB by Protein ID:NP_001095924Link to BLAST:NP_001095924.1
Original member Current member NCBI NM_016423.3 NP_057507.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016423.3Link to Protein Sequence:NP_057507.2Re-query CCDS DB by Nucleotide ID:NM_016423Re-query CCDS DB by Protein ID:NP_057507Link to BLAST:NP_057507.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001095142.1 722 Q9P2Y4 722 100% 0 0
NP_001095924.1 722 Q9P2Y4 722 100% 0 0
NP_057507.2 722 Q9P2Y4 722 100% 0 0

Chromosomal Locations for CCDS 9568.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21090536 21091140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21091411 21091542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21091865 21093290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21093586 21093591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2169 nt):
ATGGAGGGCTCACGTCCCCGCGCCCCGAGCGGCCACTTAGCGCCGTCGCCGCCGGCTTTCGACGGCGAGC
TGGATCTGCAGCGATACTCCAACGGGCCAGCCGTGAGCGCAGGGTCGCTCGGGATGGGAGCGGTGAGCTG
GTCTGAGAGTCGTGCAGGCGAACGGCGCTTCCCCTGCCCTGTATGCGGGAAGCGCTTCCGCTTCAACTCT
ATCCTTGCTTTGCACCTGCGGGCGCACCCAGGAGCCCAGGCCTTCCAGTGCCCTCACTGCGGCCACCGCG
CGGCGCAGCGGGCTCTGCTGCGCTCGCACCTGCGCACACACCAGCCCGAGCGCCCACGTAGTCCTGCTGC
ACGCCTGTTGCTGGAGTTGGAAGAGCGCGCGCTACTACGCGAGGCCCGACTGGGGAGAGCCCGAAGCTCA
GGGGGCATGCAGGCCACCCCTGCCACTGAGGGTCTGGCGCGGCCCCAGGCTCCTTCATCGTCCGCCTTCC
GTTGCCCCTACTGCAAAGGCAAGTTTCGCACCTCGGCGGAGCGCGAACGCCACCTGCACATCCTGCATAG
GCCCTGGAAGTGCGGCCTGTGCAGTTTCGGCTCCAGCCAGGAGGAGGAGCTGCTGCACCACAGCCTGACG
GCCCACGGGGCTCCCGAGCGTCCCCTGGCGGCCACCTCCGCTGCGCCTCCGCCTCAGCCTCAGCCTCAGC
CTCCACCCCAGCCCGAACCCAGATCAGTCCCCCAGCCGGAGCCGGAGCCGGAGCCCGAACGTGAGGCAAC
CCCGACCCCAGCTCCTGCCGCTCCCGAGGAGCCCCCAGCGCCTCCGGAGTTCCGCTGCCAAGTGTGCGGC
CAGAGCTTTACACAGTCTTGGTTTCTCAAGGGCCACATGCGTAAGCACAAGGCCTCCTTCGATCATGCGT
GTCCGGTGTGCGGCCGCTGCTTCAAGGAGCCCTGGTTCCTTAAGAACCACATGAAGGTGCACGCCAGCAA
GCTGGGCCCACTGCGTGCCCCGGGGCCTGCCTCCGGGCCTGCCCGCGCCCCCCAGCCTCCTGACCTCGGC
CTGCTGGCCTATGAGCCGTTGGGCCCAGCGCTCCTCTTGGCCCCGGCTCCCACCCCGGCCGAGCGCCGTG
AGCCCCCGAGCCTCTTGGGCTACCTGAGCCTGCGAGCTGGCGAGGGCCGGCCCAACGGCGAGGGTGCTGA
GCCCGGTCCCGGCCGCAGCTTCGGAGGCTTCCGCCCGCTGTCCTCTGCTCTCCCGGCCCGGGCTCGCCGG
CACCGTGCGGAGGAGCCTGAGGAAGAAGAGGAGGTGGTGGAGGCCGAGGAGGAAACCTGGGCCCGGGGCA
GGTCGCTGGGCTCTCTGGCTTCCCTGCACCCGCGCCCGGGTGAGGGACCGGGGCACTCTGCCTCTGCTGC
TGGGGCCCAGGCAAGATCGACCGCCACGCAGGAAGAGAATGGGCTGTTGGTTGGAGGGACCCGGCCTGAA
GGGGGCCGGGGCGCCACCGGCAAGGATTGTCCTTTCTGCGGAAAATCTTTCCGCTCAGCACATCACCTCA
AAGTGCATCTGCGAGTGCACACAGGCGAGCGGCCCTACAAGTGTCCGCACTGCGACTACGCGGGCACCCA
GTCCGGCTCGCTCAAGTATCACCTACAGCGCCACCACCGGGAGCAGAGGAGCGGGGCCGGCCCCGGGCCA
CCCCCGGAGCCACCGCCTCCTTCCCAGCGGGGTTCGGCCCCGCAATCTGGAGCCAAGCCGTCTCCGCAGC
CTGCGACCTGGGTGGAGGGCGCCTCAAGTCCCCGGCCTCCTTCTAGCGGTGCTGGGCCGGGGTCCCGTCG
GAAGCCCGCCAGCCCTGGGAGGACCCTGCGCAACGGGCGAGGCGGTGAGGCCGAACCCCTGGACCTGTCC
TTGCGGGCAGGGCCGGGAGGCGAGGCCGGGCCTGGGGGTGCCCTCCACCGCTGCCTCTTCTGCCCGTTCG
CCACTGGAGCCCCAGAGCTCATGGCCTTGCACCTTCAAGTGCACCACAGCCGCCGGGCTAGGGGCCGCCG
GCCACCCCAGGCTGACGCGTCCCCGCCCTATGCCCGAGTACCATCAGGAGAGACCCCTCCCAGTCCTTCG
CAGGAAGGGGAGGAGGGCTCCGGGCTGTCCAGACCCGGAGAGGCAGGGCTGGGGGGGCAAGAACGGTAG

Translation (722 aa):
MEGSRPRAPSGHLAPSPPAFDGELDLQRYSNGPAVSAGSLGMGAVSWSESRAGERRFPCPVCGKRFRFNS
ILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREARLGRARSS
GGMQATPATEGLARPQAPSSSAFRCPYCKGKFRTSAERERHLHILHRPWKCGLCSFGSSQEEELLHHSLT
AHGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPTPAPAAPEEPPAPPEFRCQVCG
QSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHASKLGPLRAPGPASGPARAPQPPDLG
LLAYEPLGPALLLAPAPTPAERREPPSLLGYLSLRAGEGRPNGEGAEPGPGRSFGGFRPLSSALPARARR
HRAEEPEEEEEVVEAEEETWARGRSLGSLASLHPRPGEGPGHSASAAGAQARSTATQEENGLLVGGTRPE
GGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSGAGPGP
PPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRPPSSGAGPGSRRKPASPGRTLRNGRGGEAEPLDLS
LRAGPGGEAGPGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRPPQADASPPYARVPSGETPPSPS
QEGEEGSGLSRPGEAGLGGQER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH