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Report for CCDS93303.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93303.1 Public Homo sapiens 3 PTPRG 24 110 108 CCDS HistoryNCBI Gene:5793Re-query CCDS DB by CCDS ID:93303.1Re-query CCDS DB by GeneID:5793See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93303.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295874.14 ENSP00000295874.10 Accepted alive Link to Ensembl Transcript Viewer:ENST00000295874.14Link to Ensembl Protein Viewer:ENSP00000295874.10Re-query CCDS DB by Nucleotide ID:ENST00000295874Re-query CCDS DB by Protein ID:ENSP00000295874
Original member Current member NCBI NM_001375471.1 NP_001362400.1 Accepted alive Link to Nucleotide Sequence:NM_001375471.1Link to Protein Sequence:NP_001362400.1Re-query CCDS DB by Nucleotide ID:NM_001375471Re-query CCDS DB by Protein ID:NP_001362400Link to BLAST:NP_001362400.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001362400.1 1416 P23470-2 1416 100% 0 0

Chromosomal Locations for CCDS 93303.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 61562288 61562372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 61748878 61748982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 61989625 61989804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62003349 62003497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62078163 62078258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62132602 62132668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62157067 62157224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62167971 62168163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62191469 62191653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62195062 62195170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62201505 62201554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62203173 62203950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62218851 62218983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62243807 62243898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62255124 62255215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62262798 62262894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62267410 62267492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62267685 62267819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62269035 62269169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62271383 62271555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62272946 62273081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62273698 62273844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62275873 62275966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62276972 62277048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62277551 62277679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62281563 62281709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62282727 62282869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62292421 62292556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62293161 62293307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4251 nt):
ATGCGGAGGTTACTGGAACCGTGTTGGTGGATTTTGTTCCTGAAAATCACCAGTTCCGTGCTCCATTATG
TCGTGTGCTTCCCCGCGTTGACAGAAGGCTACGTTGGGGCCCTGCACGAGAATAGACACGGCAGCGCAGT
GCAGATCCGCAGGCGCAAGGCTTCAGGCGACCCGTACTGGGCCTACTCTGGTGCCTATGGTCCTGAGCAC
TGGGTCACGTCTAGTGTCAGCTGTGGGGGCCGTCACCAGTCTCCTATTGACATTTTAGACCAGTATGCGC
GTGTTGGGGAAGAATACCAGGAACTGCAACTCGATGGCTTCGACAATGAGTCTTCTAACAAAACCTGGAT
GAAAAACACAGGGAAAACAGTCGCCATCCTTCTGAAAGACGACTATTTTGTCAGTGGAGCTGGTCTACCT
GGCAGATTCAAAGCTGAGAAGGTGGAATTTCACTGGGGCCACAGCAATGGCTCAGCGGGCTCTGAACACA
GCATCAATGGCAGGAGGTTTCCTGTTGAGATGCAGATTTTCTTTTACAATCCAGATGACTTTGACAGCTT
TCAAACCGCAATTTCTGAGAACAGAATAATCGGAGCCATGGCCATATTTTTTCAAGTCAGTCCGAGGGAC
AATTCTGCACTGGATCCTATTATCCACGGGTTGAAGGGTGTCGTACATCATGAGAAGGAGACCTTTCTGG
ATCCTTTCGTCCTCCGGGACCTCCTGCCTGCATCCCTGGGCAGCTATTATCGGTACACAGGTTCCTTGAC
CACACCACCGTGTAGCGAAATAGTGGAGTGGATAGTCTTCCGGAGACCCGTCCCCATCTCTTACCATCAG
CTTGAGGCTTTTTATTCCATCTTCACCACGGAGCAGCAAGACCATGTCAAGTCGGTGGAGTATCTGAGAA
ATAACTTTCGACCACAGCAGCGTCTGCATGACAGGGTGGTGTCCAAGTCCGCCGTCCGTGACTCCTGGAA
CCACGACATGACAGACTTCTTAGAAAACCCACTGGGGACAGAAGCCTCTAAAGTTTGCAGCTCTCCACCC
ATCCACATGAAGGTGCAGCCTCTGAACCAGACGGCACTGCAGGTGTCCTGGAGCCAGCCGGAGACTATCT
ACCACCCACCCATCATGAACTACATGATCTCCTACAGCTGGACCAAGAATGAGGACGAGAAGGAGAAGAC
GTTTACAAAGGACAGCGACAAAGACTTGAAAGCCACCATTAGCCATGTCTCACCCGATAGCCTTTACCTG
TTCCGAGTCCAGGCCGTGTGTCGGAACGACATGCGCAGCGACTTTAGCCAGACGATGCTGTTTCAAGCTA
ATACCACTCGAATATTCCAAGGGACCAGAATAGTGAAAACAGGAGTGCCCACAGCGTCTCCTGCCTCTTC
AGCCGACATGGCCCCCATCAGCTCGGGGTCTTCTACCTGGACGTCCTCTGGCATCCCATTCTCATTTGTT
TCCATGGCAACTGGGATGGGCCCCTCCTCCAGTGGCAGCCAGGCCACAGTGGCCTCGGTGGTCACCAGCA
CGCTGCTCGCCGGCCTGGGGTTCGGCGGTGGTGGCATCTCCTCTTTCCCCAGCACTGTGTGGCCCACGCG
CCTCCCGACGGCCGCCTCAGCCAGCAAGCAGGCGGCTAGGCCAGTCCTAGCCACCACAGAGGCCTTGGCT
TCTCCAGGGCCCGATGGTGATTCGTCACCAACCAAGGACGGCGAGGGCACCGAGGAAGGAGAGAAGGATG
AGAAAAGCGAGAGTGAGGATGGGGAGCGGGAGCACGAGGAGGATGGAGAGAAGGACTCCGAAAAGAAGGA
GAAGAGTGGGGTGACCCACGCTGCCGAGGAGCGGAATCAGACGGAGCCCAGCCCCACACCCTCGTCTCCT
AACAGGACTGCCGAGGGAGGGCATCAGACTATACCTGGGCATGAGCAGGATCACACTGCCGTCCCCACAG
ACCAGACGGGCGGAAGGAGGGATGCCGGCCCAGGCCTGGACCCCGACATGGTCACCTCCACCCAAGTGCC
CCCCACCGCCACAGAGGAGCAGTATGCAGGGAGTGATCCCAAGAGGCCCGAAATGCCATCTAAAAAGCCT
ATGTCCCGCGGGGACCGATTTTCTGAAGACAGCAGATTTATCACTGTTAATCCAGCGGAAAAAAACACCT
CTGGAATGATAAGCCGCCCTGCTCCAGGGAGGATGGAGTGGATCATCCCTCTGATTGTGGTATCAGCCTT
GACCTTCGTGTGCCTCATCCTTCTCATTGCTGTGCTCGTTTACTGGAGAAAATGTTTTCAGACTGCTCAT
TTCTATGTGGAAGACAGCAGTTCACCTCGAGTGGTCCCTAATGAAAGTATCCCTATTATTCCTATTCCGG
ATGACATGGAAGCCATTCCTGTCAAACAGTTTGTCAAACACATCGGTGAGCTCTATTCTAATAACCAGCA
TGGGTTCTCTGAGGATTTTGAGGAAGTCCAGCGCTGTACTGCTGATATGAACATCACTGCAGAGCATTCC
AATCATCCAGAAAACAAGCACAAAAACAGATACATCAACATTTTAGCATATGATCACAGTAGGGTGAAGT
TAAGACCTTTACCAGGAAAAGACTCTAAGCACAGCGACTACATTAATGCAAACTATGTTGATGGTTACAA
CAAAGCAAAAGCCTACATTGCCACCCAAGGACCTTTGAAGTCTACATTTGAAGATTTCTGGAGGATGATT
TGGGAACAAAACACTGGAATCATTGTGATGATTACGAACCTTGTGGAAAAAGGAAGACGAAAATGTGATC
AGTATTGGCCAACAGAGAACAGTGAGGAATATGGAAACATTATTGTCACGCTGAAGAGCACAAAAATACA
TGCCTGCTACACTGTTCGTCGTTTTTCAATCAGAAATACAAAAGTGAAAAAGGGTCAGAAGGGAAATCCC
AAGGGTCGTCAGAATGAAAGGGTAGTGATCCAGTATCACTATACACAGTGGCCTGACATGGGAGTTCCCG
AGTATGCCCTTCCAGTACTGACTTTCGTGAGGAGATCCTCAGCAGCTCGGATGCCAGAAACGGGCCCTGT
GTTGGTGCACTGCAGTGCTGGTGTGGGCAGAACAGGCACCTATATTGTAATAGACAGCATGCTGCAACAG
ATAAAAGACAAAAGCACAGTTAACGTCCTGGGATTCCTGAAGCATATCAGGACACAGCGTAACTACCTCG
TCCAGACTGAGGAGCAGTACATTTTCATCCATGATGCCTTGTTGGAAGCCATTCTTGGAAAGGAGACTGA
AGTATCTTCAAATCAGCTGCACAGCTATGTTAACAGCATCCTTATACCAGGAGTAGGAGGAAAGACACGA
CTGGAAAAGCAATTCAAGCTGGTCACACAGTGTAATGCAAAATATGTGGAATGTTTCAGTGCTCAGAAAG
AGTGTAACAAAGAAAAGAACAGAAACTCTTCAGTTGTGCCATCTGAGCGTGCTCGAGTGGGTCTTGCACC
ATTGCCTGGAATGAAAGGAACAGATTACATTAATGCTTCTTATATCATGGGCTATTATAGGAGCAATGAA
TTTATTATAACTCAGCATCCTCTGCCACATACTACGAAAGATTTCTGGCGAATGATTTGGGATCATAACG
CACAGATCATTGTCATGCTGCCAGACAACCAGAGCTTGGCAGAAGATGAGTTTGTGTACTGGCCAAGTCG
AGAAGAATCCATGAACTGTGAGGCCTTTACCGTCACCCTTATCAGCAAAGACAGACTGTGCCTCTCTAAT
GAAGAACAAATTATCATCCATGACTTTATCCTTGAAGCTACACAGGATGACTATGTCTTAGAAGTTCGGC
ACTTTCAGTGTCCCAAATGGCCTAACCCAGATGCCCCCATAAGTAGTACCTTTGAACTTATCAACGTCAT
CAAGGAAGAGGCCTTAACAAGGGATGGTCCCACCATTGTTCATGATGAGTATGGAGCAGTTTCAGCAGGA
ATGTTATGTGCCCTTACCACCCTGTCCCAGCAACTGGAGAATGAAAATGCTGTGGATGTTTTCCAGGTTG
CAAAAATGATCAATCTTATGAGGCCTGGAGTATTCACAGACATTGAACAATACCAGTTCATCTATAAAGC
AATGCTTAGCTTGGTCAGCACTAAAGAAAATGGAAATGGTCCCATGACAGTAGACAAAAATGGTGCTGTT
CTTATTGCAGATGAATCAGACCCTGCTGAGAGCATGGAGTCCCTAGTGTGA

Translation (1416 aa):
MRRLLEPCWWILFLKITSSVLHYVVCFPALTEGYVGALHENRHGSAVQIRRRKASGDPYWAYSGAYGPEH
WVTSSVSCGGRHQSPIDILDQYARVGEEYQELQLDGFDNESSNKTWMKNTGKTVAILLKDDYFVSGAGLP
GRFKAEKVEFHWGHSNGSAGSEHSINGRRFPVEMQIFFYNPDDFDSFQTAISENRIIGAMAIFFQVSPRD
NSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQ
LEAFYSIFTTEQQDHVKSVEYLRNNFRPQQRLHDRVVSKSAVRDSWNHDMTDFLENPLGTEASKVCSSPP
IHMKVQPLNQTALQVSWSQPETIYHPPIMNYMISYSWTKNEDEKEKTFTKDSDKDLKATISHVSPDSLYL
FRVQAVCRNDMRSDFSQTMLFQANTTRIFQGTRIVKTGVPTASPASSADMAPISSGSSTWTSSGIPFSFV
SMATGMGPSSSGSQATVASVVTSTLLAGLGFGGGGISSFPSTVWPTRLPTAASASKQAARPVLATTEALA
SPGPDGDSSPTKDGEGTEEGEKDEKSESEDGEREHEEDGEKDSEKKEKSGVTHAAEERNQTEPSPTPSSP
NRTAEGGHQTIPGHEQDHTAVPTDQTGGRRDAGPGLDPDMVTSTQVPPTATEEQYAGSDPKRPEMPSKKP
MSRGDRFSEDSRFITVNPAEKNTSGMISRPAPGRMEWIIPLIVVSALTFVCLILLIAVLVYWRKCFQTAH
FYVEDSSSPRVVPNESIPIIPIPDDMEAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHS
NHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMI
WEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNP
KGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQ
IKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIPGVGGKTR
LEKQFKLVTQCNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNE
FIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFVYWPSREESMNCEAFTVTLISKDRLCLSN
EEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAG
MLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAMLSLVSTKENGNGPMTVDKNGAV
LIADESDPAESMESLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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