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Report for CCDS92158.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92158.1 Public Homo sapiens 16 TENT4B 24 110 108 CCDS HistoryNCBI Gene:64282Re-query CCDS DB by CCDS ID:92158.1Re-query CCDS DB by GeneID:64282See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92158.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000561678.7 ENSP00000455837.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000561678.7Link to Ensembl Protein Viewer:ENSP00000455837.3Re-query CCDS DB by Nucleotide ID:ENST00000561678Re-query CCDS DB by Protein ID:ENSP00000455837
Original member Current member NCBI NM_001365324.3 NP_001352253.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001365324.3Link to Protein Sequence:NP_001352253.1Re-query CCDS DB by Nucleotide ID:NM_001365324Re-query CCDS DB by Protein ID:NP_001352253Link to BLAST:NP_001352253.1

Chromosomal Locations for CCDS 92158.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 50153622 50154259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50211323 50211446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50214221 50214267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50216075 50216195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50217556 50217663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50222306 50222434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50223174 50223387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50224657 50224783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50224891 50224994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50225098 50225285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50227839 50228003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50229152 50229328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2142 nt):
ATGGATCCGAGGATCGCCTGGTTTCAGCCAGAGCAGCTCGGACCGTCCAACAGTCTGTGGATGCAGATCT
GGGAGACGACCCAGGGGCTGAGGAACCTCTACTTCAACCACCACTGTCACAGCAGCGGCGGCGCGAGCGG
CGGCGGCGGCAGCAGCAGCAGCAGCAGCACGGCCACCGGCGGGAGCGGCAGCAGCACCGGCAGCCCCGGC
GGCGCGGCCTCGGCCCCGGCCCCGGCCCCGGCCGGCATGTATCGCTCCGGGGAGCGCCTGCTGGGCAGCC
ACGCGCTGCCCGCGGAGCAGCGGGACTTCCTGCCCCTAGAGACGACCAACAACAACAACAACCACCACCA
GCCCGGGGCCTGGGCCCGCCGGGCGGGCTCCTCGGCGTCCTCGCCTCCCTCGGCGTCCTCGTCCCCGCAC
CCTTCGGCCGCCGTCCCCGCCGCCGATCCAGCCGATTCGGCCTCGGGCAGCAGCAACAAGAGGAAGCGCG
ACAACAAGGCCAGCACGTATGGACTCAACTACAGCCTGCTGCAGCCCAGCGGAGGGCGGGCCGCGGGGGG
CGGCCGAGCAGACGGCGGCGGGGTCGTGTACAGCGGGACCCCGTGGAAACGGAGGAACTACAACCAGGGA
GTCGTGGGTCTGCATGAAGAAATCAGTGATTTTTATGAATACATGTCTCCAAGACCTGAGGAGGAGAAGA
TGCGGATGGAGGTGGTGAACAGGATCGAGAGTGTAATTAAGGAGCTCTGGCCCAGCGCTGACGTCCAGAT
ATTTGGAAGTTTTAAAACTGGACTTTATTTACCTACTAGTGACATCGACCTAGTGGTGTTTGGGAAGTGG
GAGAACCTACCCCTCTGGACTCTGGAAGAAGCTCTTCGGAAACACAAAGTCGCAGATGAGGATTCGGTGA
AAGTTTTAGACAAAGCAACTGTACCTATTATTAAATTAACAGATTCTTTTACTGAAGTGAAAGTTGATAT
CAGCTTTAATGTACAGAATGGCGTGAGAGCAGCTGACCTCATCAAAGATTTTACCAAGAAATATCCTGTA
TTGCCATACTTGGTTTTAGTATTGAAACAATTCCTATTGCAGAGGGACCTTAATGAAGTATTTACAGGTG
GAATTGGTTCTTATAGTCTCTTTTTAATGGCAGTCAGTTTCCTTCAGTTACATCCCAGGGAAGATGCTTG
CATCCCCAATACAAACTATGGTGTTCTCTTAATAGAATTTTTTGAATTATATGGACGACACTTCAATTAT
TTAAAGACTGGCATCCGGATAAAGGATGGTGGTTCATATGTGGCCAAAGATGAAGTACAGAAAAATATGC
TAGATGGCTACAGGCCATCAATGCTTTATATCGAAGATCCTTTACAACCAGGTAACGATGTTGGAAGGAG
TTCATATGGGGCCATGCAAGTGAAGCAGGCCTTTGATTATGCCTACGTTGTTTTGAGTCATGCTGTATCA
CCAATAGCAAAGTACTATCCCAACAATGAAACAGAAAGCATACTAGGTAGAATAATTAGAGTAACAGATG
AAGTTGCCACATATAGAGATTGGATATCAAAGCAGTGGGGCTTGAAGAATAGACCTGAGCCTTCATGCAA
TGGAAATGGTGTTACCTTGATAGTAGATACTCAGCAGTTAGATAAATGTAATAATAATCTATCTGAAGAA
AATGAAGCCCTTGGAAAATGTAGAAGTAAAACCTCGGAATCTCTTAGTAAACACTCTTCAAACTCTTCAT
CAGGTCCAGTGTCGTCCTCTTCTGCCACACAGTCCAGCTCTAGTGATGTAGATTCCGATGCAACACCATG
CAAAACCCCGAAACAGCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTTG
GAGTCCTCTCAGGCAGTTGGGAAAATGCAAAGCACCCAAACCACTAACACATCCAACAGCACCAACAAAT
CTCAGCATGGATCAGCAAGGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCA
TGGTTCCTTGATGACAAACAAACAACATCAAGGCAAATCCAATAATCAGTATTACCATGGCAAAAAGAGG
AAACACAAGAGGGACGCGCCCCTCTCAGACCTCTGTAGATAG

Translation (713 aa):
MDPRIAWFQPEQLGPSNSLWMQIWETTQGLRNLYFNHHCHSSGGASGGGGSSSSSSTATGGSGSSTGSPG
GAASAPAPAPAGMYRSGERLLGSHALPAEQRDFLPLETTNNNNNHHQPGAWARRAGSSASSPPSASSSPH
PSAAVPAADPADSASGSSNKRKRDNKASTYGLNYSLLQPSGGRAAGGGRADGGGVVYSGTPWKRRNYNQG
VVGLHEEISDFYEYMSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLVVFGKW
ENLPLWTLEEALRKHKVADEDSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKKYPV
LPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIPNTNYGVLLIEFFELYGRHFNY
LKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDVGRSSYGAMQVKQAFDYAYVVLSHAVS
PIAKYYPNNETESILGRIIRVTDEVATYRDWISKQWGLKNRPEPSCNGNGVTLIVDTQQLDKCNNNLSEE
NEALGKCRSKTSESLSKHSSNSSSGPVSSSSATQSSSSDVDSDATPCKTPKQLLCRPSTGNRVGSQDVSL
ESSQAVGKMQSTQTTNTSNSTNKSQHGSARLFRSSSKGFQGTTQTSHGSLMTNKQHQGKSNNQYYHGKKR
KHKRDAPLSDLCR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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