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Report for CCDS43884.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43884.1 Public Homo sapiens 9 KYAT1 24 110 108 CCDS HistoryNCBI Gene:883Re-query CCDS DB by CCDS ID:43884.1Re-query CCDS DB by GeneID:883See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43884.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302586.8 ENSP00000302227.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302586.8Link to Ensembl Protein Viewer:ENSP00000302227.3Re-query CCDS DB by Nucleotide ID:ENST00000302586Re-query CCDS DB by Protein ID:ENSP00000302227
Original member Current member NCBI NM_001122671.2 NP_001116143.1 Accepted alive Link to Nucleotide Sequence:NM_001122671.2Link to Protein Sequence:NP_001116143.1Re-query CCDS DB by Nucleotide ID:NM_001122671Re-query CCDS DB by Protein ID:NP_001116143Link to BLAST:NP_001116143.1
Original member Current member NCBI NM_001352988.2 NP_001339917.1 Accepted alive Link to Nucleotide Sequence:NM_001352988.2Link to Protein Sequence:NP_001339917.1Re-query CCDS DB by Nucleotide ID:NM_001352988Re-query CCDS DB by Protein ID:NP_001339917Link to BLAST:NP_001339917.1
Original member Current member NCBI NM_001352989.2 NP_001339918.1 Accepted alive Link to Nucleotide Sequence:NM_001352989.2Link to Protein Sequence:NP_001339918.1Re-query CCDS DB by Nucleotide ID:NM_001352989Re-query CCDS DB by Protein ID:NP_001339918Link to BLAST:NP_001339918.1
Original member Current member NCBI NM_001352990.2 NP_001339919.1 Accepted alive Link to Nucleotide Sequence:NM_001352990.2Link to Protein Sequence:NP_001339919.1Re-query CCDS DB by Nucleotide ID:NM_001352990Re-query CCDS DB by Protein ID:NP_001339919Link to BLAST:NP_001339919.1
Original member Current member NCBI NM_001352991.2 NP_001339920.1 Accepted alive Link to Nucleotide Sequence:NM_001352991.2Link to Protein Sequence:NP_001339920.1Re-query CCDS DB by Nucleotide ID:NM_001352991Re-query CCDS DB by Protein ID:NP_001339920Link to BLAST:NP_001339920.1
Original member Current member NCBI NM_001352992.2 NP_001339921.1 Accepted alive Link to Nucleotide Sequence:NM_001352992.2Link to Protein Sequence:NP_001339921.1Re-query CCDS DB by Nucleotide ID:NM_001352992Re-query CCDS DB by Protein ID:NP_001339921Link to BLAST:NP_001339921.1
Original member Current member NCBI NM_001352993.2 NP_001339922.1 Accepted alive Link to Nucleotide Sequence:NM_001352993.2Link to Protein Sequence:NP_001339922.1Re-query CCDS DB by Nucleotide ID:NM_001352993Re-query CCDS DB by Protein ID:NP_001339922Link to BLAST:NP_001339922.1
Original member Current member NCBI NM_004059.5 NP_004050.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004059.5Link to Protein Sequence:NP_004050.3Re-query CCDS DB by Nucleotide ID:NM_004059Re-query CCDS DB by Protein ID:NP_004050Link to BLAST:NP_004050.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001116143.1 422 Q16773-1 422 100% 0 0
NP_001339917.1 422 Q16773-1 422 100% 0 0
NP_001339918.1 422 Q16773-1 422 100% 0 0
NP_001339919.1 422 Q16773-1 422 100% 0 0
NP_001339920.1 422 Q16773-1 422 100% 0 0
NP_001339921.1 422 Q16773-1 422 100% 0 0
NP_001339922.1 422 Q16773-1 422 100% 0 0
NP_004050.3 422 Q16773-1 422 100% 0 0

Chromosomal Locations for CCDS 43884.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 128833584 128833643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128833740 128833826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128835323 128835402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128835481 128835667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128835779 128835868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128835997 128836073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128836802 128836922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128837685 128837813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128838051 128838137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128838218 128838367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128842654 128842801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128845353 128845405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1269 nt):
ATGGCCAAACAGCTGCAGGCCCGAAGGCTAGACGGGATCGACTACAACCCCTGGGTGGAGTTTGTGAAAC
TGGCCAGTGAGCATGACGTCGTGAACTTGGGCCAGGGCTTCCCGGATTTCCCACCACCAGACTTTGCCGT
GGAAGCCTTTCAGCACGCTGTCAGTGGAGACTTCATGCTTAACCAGTACACCAAGACATTTGGTTACCCA
CCACTGACGAAGATCCTGGCAAGTTTCTTTGGGGAGCTGCTGGGTCAGGAGATAGACCCGCTCAGGAATG
TGCTGGTGACTGTTGGTGGCTATGGGGCCCTGTTCACAGCCTTCCAGGCCCTGGTGGACGAAGGAGACGA
GGTCATCATCATCGAACCCTTTTTTGACTGCTACGAGCCCATGACAATGATGGCAGGGGGTCGTCCTGTG
TTTGTGTCCCTGAAGCCGGGTCCCATCCAGAATGGAGAACTGGGTTCCAGCAGCAACTGGCAGCTGGACC
CCATGGAGCTGGCCGGCAAATTCACATCACGCACCAAAGCCCTGGTCCTCAACACCCCCAACAACCCCCT
GGGCAAGGTGTTCTCCAGGGAAGAGCTGGAGCTGGTGGCCAGCCTTTGCCAGCAGCATGACGTGGTGTGT
ATCACTGATGAAGTCTACCAGTGGATGGTCTACGACGGGCACCAGCACATCAGCATTGCCAGCCTCCCTG
GCATGTGGGAACGGACCCTGACCATCGGCAGCGCCGGCAAGACCTTCAGCGCCACTGGCTGGAAGGTGGG
CTGGGTCCTGGGTCCAGATCACATCATGAAGCACCTGCGGACCGTGCACCAGAACTCCGTCTTCCACTGC
CCCACGCAGAGCCAGGCTGCAGTAGCCGAGAGCTTTGAACGGGAGCAGCTGCTCTTCCGCCAACCCAGCA
GCTACTTTGTGCAGTTCCCGCAGGCCATGCAGCGCTGCCGTGACCACATGATACGTAGCCTACAGTCAGT
GGGCCTGAAGCCCATCATCCCTCAGGGCAGCTACTTCCTCATCACAGACATCTCAGACTTCAAGAGGAAG
ATGCCTGACTTGCCTGGAGCTGTGGATGAGCCCTATGACAGACGCTTCGTCAAGTGGATGATCAAGAACA
AGGGCTTGGTGGCCATCCCTGTCTCCATCTTCTATAGTGTGCCACATCAGAAGCACTTTGACCACTATAT
CCGCTTCTGTTTTGTGAAGGATGAAGCCACGCTCCAGGCCATGGACGAGAAGCTGCGGAAGTGGAAGGTG
GAACTCTAG

Translation (422 aa):
MAKQLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYP
PLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPV
FVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVC
ITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHC
PTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRK
MPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKV
EL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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