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Report for CCDS87058.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87058.1 Public Homo sapiens 3 DYNC1LI1 24 110 108 CCDS HistoryNCBI Gene:51143Re-query CCDS DB by CCDS ID:87058.1Re-query CCDS DB by GeneID:51143See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87058.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000432458.6 ENSP00000407279.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432458.6Link to Ensembl Protein Viewer:ENSP00000407279.2Re-query CCDS DB by Nucleotide ID:ENST00000432458Re-query CCDS DB by Protein ID:ENSP00000407279
Original member Current member NCBI NM_001329135.2 NP_001316064.1 Accepted alive Link to Nucleotide Sequence:NM_001329135.2Link to Protein Sequence:NP_001316064.1Re-query CCDS DB by Nucleotide ID:NM_001329135Re-query CCDS DB by Protein ID:NP_001316064Link to BLAST:NP_001316064.1

Chromosomal Locations for CCDS 87058.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 32526799 32526908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32528446 32528601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32529540 32529660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32530284 32530328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32530461 32530520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32532986 32533097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32534511 32534646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32537011 32537104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32541037 32541206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32570346 32570419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32570625 32570770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1224 nt):
ATGGCGGCCGTGGGGCGAGTCGGCTCCTTCGGTTCTTCTCCGCCGGGATTATCCTCGACTTACACTGGCG
GCCCCTTGGGCAACGAGATAGCGTCGGGCAACGGTGGCGCCGCGGCAGGCGACGACGAGGACGGGCAGAA
CCTTTGGTCCTGCATCCTCAGCGAGGTCTCCACCCGCTCGCGCTCCAAGCTCCCTGCGGGGAAGAACGTG
CTACTGCTGGTGATTAGAGACTTCCAAGAATATGTAGAGCCAGGAGAAGACTTCCCGGCTTCTCCCCAGA
GAAGAAATACTGCGTCACAAGAAGACAAAGATGACAGTGTAGTTTTACCTCTGGGTGCGGATACACTTAC
ACATAACTTGGGCATTCCAGTACTAGTAGTTTGCACAAAGTGTGATGCCATTAGTGTATTGGAGAAAGAA
CATGACTACAGAGATGAACATTTTGATTTTATTCAGTCACATATCCGGAAGTTTTGTTTACAGTATGGTG
CAGCACTTATTTACACTTCAGTAAAAGAAAACAAAAATATAGACTTAGTATATAAATACATCGTTCAGAA
ACTATATGGATTTCCCTATAAGATTCCTGCTGTTGTTGTGGAAAAGGATGCAGTATTTATTCCAGCAGGG
TGGGATAATGATAAGAAAATAGGAATATTACATGAAAATTTTCAAACATTAAAAGCAGAAGATAATTTTG
AAGACATCATAACTAAACCACCTGTTCGAAAGTTTGTACATGAGAAGGAAATTATGGCAGAAGATGATCA
GGTGTTTCTTATGAAGCTACAGTCCCTTTTAGCAAAGCAACCACCAACTGCAGCTGGAAGGCCTGTGGAT
GCCTCACCAAGAGTCCCAGGAGGCTCCCCACGAACACCAAATAGATCTGTATCATCTAATGTTGCCAGCG
TGTCACCCATTCCTGCTGGGTCAAAAAAAATTGATCCAAACATGAAAGCTGGAGCTACAAGTGAAGGCGT
TCTGGCAAATTTCTTCAACAGTTTGTTGAGTAAAAAGACTGGCTCTCCAGGAGGCCCTGGTGTGAGTGGT
GGTAGCCCTGCAGGTGGGGCTGGAGGTGGAAGCAGTGGTTTACCACCATCCACCAAAAAGTCAGGCCAGA
AGCCTGTCTTAGATGTTCATGCAGAACTAGACAGAATTACACGAAAACCAGTTACAGTTTCTCCCACAAC
ACCTACATCTCCTACGGAAGGAGAAGCTTCTTGA

Translation (407 aa):
MAAVGRVGSFGSSPPGLSSTYTGGPLGNEIASGNGGAAAGDDEDGQNLWSCILSEVSTRSRSKLPAGKNV
LLLVIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKE
HDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAG
WDNDKKIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLAKQPPTAAGRPVD
ASPRVPGGSPRTPNRSVSSNVASVSPIPAGSKKIDPNMKAGATSEGVLANFFNSLLSKKTGSPGGPGVSG
GSPAGGAGGGSSGLPPSTKKSGQKPVLDVHAELDRITRKPVTVSPTTPTSPTEGEAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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