NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS81839.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81839.1 Public Homo sapiens 14 RPS6KA5 24 110 108 CCDS HistoryNCBI Gene:9252Re-query CCDS DB by CCDS ID:81839.1Re-query CCDS DB by GeneID:9252See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81839.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000536315.6 ENSP00000442803.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536315.6Link to Ensembl Protein Viewer:ENSP00000442803.2Re-query CCDS DB by Nucleotide ID:ENST00000536315Re-query CCDS DB by Protein ID:ENSP00000442803
Original member Current member NCBI NM_001322235.2 NP_001309164.1 Accepted alive Link to Nucleotide Sequence:NM_001322235.2Link to Protein Sequence:NP_001309164.1Re-query CCDS DB by Nucleotide ID:NM_001322235Re-query CCDS DB by Protein ID:NP_001309164Link to BLAST:NP_001309164.1
Original member Current member NCBI NM_001322237.2 NP_001309166.1 Accepted alive Link to Nucleotide Sequence:NM_001322237.2Link to Protein Sequence:NP_001309166.1Re-query CCDS DB by Nucleotide ID:NM_001322237Re-query CCDS DB by Protein ID:NP_001309166Link to BLAST:NP_001309166.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001309164.1 723 O75582-3 723 100% 0 0
NP_001309166.1 723 O75582-3 723 100% 0 0

Chromosomal Locations for CCDS 81839.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 90872074 90872322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90873632 90873795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90875201 90875360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90890487 90890678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90894413 90894583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90899329 90899422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90900108 90900241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90900611 90900736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90902808 90902969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90906149 90906299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90920206 90920309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90923113 90923196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90943078 90943185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90947435 90947550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90978306 90978462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2172 nt):
ATGAAAGTTTTGAAAAAGGCAACAATCGTTCAAAAGGCCAAAACCACAGAGCATACAAGGACAGAACGAC
AAGTCCTGGAACACATTAGGCAGTCGCCATTTTTGGTAACATTACATTATGCTTTCCAGACAGAAACCAA
ACTTCATCTCATTTTAGATTATATAAATGGTGGTGAACTTTTTACTCATCTTTCTCAAAGAGAGCGTTTC
ACAGAGCATGAGGTGCAGATTTATGTTGGAGAGATTGTGCTTGCCCTCGAACATCTCCACAAGTTGGGGA
TTATATATCGTGATATTAAGCTTGAGAATATTCTACTTGATTCTAATGGCCATGTGGTGCTGACAGATTT
TGGTCTGAGTAAGGAGTTTGTGGCTGATGAAACTGAAAGAGCATATTCCTTTTGTGGAACTATTGAATAC
ATGGCACCAGATATTGTCAGAGGGGGAGATTCAGGACATGACAAGGCAGTTGACTGGTGGAGTTTGGGTG
TTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAAAAAATTCCCAAGCTGA
GATATCTAGGAGAATATTAAAAAGTGAGCCTCCATATCCCCAAGAAATGAGTGCTTTAGCGAAAGACCTA
ATTCAGCGTCTTTTGATGAAAGATCCCAAGAAGAGATTGGGATGTGGTCCACGTGATGCAGATGAAATCA
AAGAACATCTCTTCTTTCAGAAAATAAATTGGGATGATTTAGCCGCCAAAAAAGTGCCTGCACCATTTAA
GCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTAT
TCTCCCGCAGCCCTGCCCCAGAGTTCTGAGAAGCTGTTTCAGGGCTATTCCTTTGTTGCTCCTTCCATCC
TATTCAAGCGTAATGCAGCTGTCATAGACCCTCTTCAGTTTCACATGGGAGTTGAACGTCCTGGAGTGAC
AAATGTTGCCAGGAGTGCAATGATGAAGGACTCTCCATTCTATCAACACTATGACCTAGATTTGAAGGAC
AAACCCCTGGGAGAAGGTAGTTTTTCAATTTGTCGAAAGTGTGTGCATAAAAAAAGTAACCAAGCTTTTG
CAGTCAAAATAATCAGCAAAAGGATGGAAGCCAATACTCAAAAGGAAATAACAGCTCTGAAACTCTGTGA
AGGACACCCCAATATTGTGAAGTTGCATGAAGTTTTTCATGATCAGCTTCACACGTTTCTAGTGATGGAA
CTTCTGAATGGAGGAGAACTGTTTGAGCGCATTAAGAAAAAGAAGCACTTCAGTGAGACGGAAGCCAGCT
ACATCATGAGGAAGCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGTGCACAGGGATCTGAA
ACCTGAGAATTTATTGTTCACCGATGAAAATGACAATTTGGAAATTAAAATAATTGATTTTGGATTTGCA
CGGCTAAAGCCACCGGATAATCAGCCCCTGAAGACTCCATGCTTCACCCTTCATTATGCCGCCCCAGAGC
TCTTGAATCAGAACGGCTACGATGAGTCCTGTGACCTGTGGAGCTTGGGCGTCATTTTGTACACAATGTT
GTCAGGACAGGTTCCCTTCCAATCTCATGACCGAAGTTTGACGTGTACCAGCGCGGTGGAAATCATGAAG
AAAATTAAAAAGGGAGATTTCTCCTTTGAAGGAGAAGCCTGGAAGAATGTATCCCAAGAGGCTAAAGATT
TGATCCAAGGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTCTGGCTTGAGGTACAATGAATG
GCTACAAGATGGAAGTCAGCTGTCCTCCAATCCTCTGATGACTCCGGATATTCTAGGATCTTCCGGAGCT
GCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATACAAGAGAGAGGGGTTTTGCCTTC
AGAATGTTGATAAGGCCCCTTTGGCTAAGAGAAGAAAAATGAAAAAGACTAGCACCAGTACCGAGACGCG
CAGCAGTTCCAGTGAGAGTTCCCATTCTTCTTCCTCTCATTCTCACGGTAAAACTACACCCACCAAGACA
CTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACCCTCTTCCAGTTCTCGGACTCAGTAGCTT
AG

Translation (723 aa):
MKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF
TEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYSFCGTIEY
MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDL
IQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNFAEEFTEMDPTY
SPAALPQSSEKLFQGYSFVAPSILFKRNAAVIDPLQFHMGVERPGVTNVARSAMMKDSPFYQHYDLDLKD
KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVME
LLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFA
RLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK
KIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGA
AVHTCVKATFHAFNKYKREGFCLQNVDKAPLAKRRKMKKTSTSTETRSSSSESSHSSSSHSHGKTTPTKT
LQPSNPADSNNPETLFQFSDSVA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH