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Report for CCDS14530.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14530.1 Public Homo sapiens X TSC22D3 24 110 108 CCDS HistoryNCBI Gene:1831Re-query CCDS DB by CCDS ID:14530.1Re-query CCDS DB by GeneID:1831See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14530.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315660.8 ENSP00000314655.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000315660.8Link to Ensembl Protein Viewer:ENSP00000314655.4Re-query CCDS DB by Nucleotide ID:ENST00000315660Re-query CCDS DB by Protein ID:ENSP00000314655
Original member Current member EBI ENST00000372383.9 ENSP00000361458.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372383.9Link to Ensembl Protein Viewer:ENSP00000361458.4Re-query CCDS DB by Nucleotide ID:ENST00000372383Re-query CCDS DB by Protein ID:ENSP00000361458
Original member Current member EBI ENST00000372384.6 ENSP00000361459.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372384.6Link to Ensembl Protein Viewer:ENSP00000361459.2Re-query CCDS DB by Nucleotide ID:ENST00000372384Re-query CCDS DB by Protein ID:ENSP00000361459
Original member Current member EBI ENST00000506081.5 ENSP00000427427.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000506081.5Link to Ensembl Protein Viewer:ENSP00000427427.1Re-query CCDS DB by Nucleotide ID:ENST00000506081Re-query CCDS DB by Protein ID:ENSP00000427427
Original member Current member NCBI NM_001318468.1 NP_001305397.1 Accepted alive Link to Nucleotide Sequence:NM_001318468.1Link to Protein Sequence:NP_001305397.1Re-query CCDS DB by Nucleotide ID:NM_001318468Re-query CCDS DB by Protein ID:NP_001305397Link to BLAST:NP_001305397.1
Original member Current member NCBI NM_001318470.1 NP_001305399.1 Accepted alive Link to Nucleotide Sequence:NM_001318470.1Link to Protein Sequence:NP_001305399.1Re-query CCDS DB by Nucleotide ID:NM_001318470Re-query CCDS DB by Protein ID:NP_001305399Link to BLAST:NP_001305399.1
Original member Current member NCBI NM_198057.3 NP_932174.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198057.3Link to Protein Sequence:NP_932174.1Re-query CCDS DB by Nucleotide ID:NM_198057Re-query CCDS DB by Protein ID:NP_932174Link to BLAST:NP_932174.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305397.1 200 Q99576-3 200 100% 0 0
NP_001305399.1 200 Q99576-3 200 100% 0 0
NP_932174.1 200 Q99576-3 200 100% 0 0

Chromosomal Locations for CCDS 14530.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 107714519 107714749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107715899 107715950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107775100 107775419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (603 nt):
ATGGCCCAGTCCAAGCTCGATTGCCGCTCACCTGTCGGCCTCGACTGCTGCAACTGCTGCCTGGACCTGG
CCCATCGGAGTGGGCTCCAGCGAGGCAGCAGCGGGGAGAACAACAACCCGGGCAGCCCTACAGTGAGCAA
CTTTCGGCAGCTGCAGGAAAAGCTGGTCTTTGAGAACCTCAATACCGACAAGCTCAACAGCATAATGCGG
CAGGATTCGCTAGAGCCGGTGCTGCGGGACCCCTGCTACCTGATCAACGAGGGCATCTGCAACCGCAACA
TCGACCAGACCATGCTCTCCATCCTGCTCTTCTTCCACAGTGCCTCCGGAGCCAGCGTGGTGGCCATAGA
CAACAAGATCGAACAGGCCATGGATCTGGTGAAGAATCATCTGATGTATGCTGTGAGAGAGGAGGTGGAG
ATCCTGAAGGAGCAGATCCGAGAGCTGGTGGAGAAGAACTCCCAGCTAGAGCGTGAGAACACCCTGTTGA
AGACCCTGGCAAGCCCAGAGCAGCTGGAGAAGTTCCAGTCCTGTCTGAGCCCTGAAGAGCCAGCTCCCGA
ATCCCCACAAGTGCCCGAGGCCCCTGGTGGTTCTGCGGTGTAA

Translation (200 aa):
MAQSKLDCRSPVGLDCCNCCLDLAHRSGLQRGSSGENNNPGSPTVSNFRQLQEKLVFENLNTDKLNSIMR
QDSLEPVLRDPCYLINEGICNRNIDQTMLSILLFFHSASGASVVAIDNKIEQAMDLVKNHLMYAVREEVE
ILKEQIRELVEKNSQLERENTLLKTLASPEQLEKFQSCLSPEEPAPESPQVPEAPGGSAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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