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Report for CCDS82805.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82805.1 Public Homo sapiens 3 PPP4R2 24 110 108 CCDS HistoryNCBI Gene:151987Re-query CCDS DB by CCDS ID:82805.1Re-query CCDS DB by GeneID:151987See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82805.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000495566.1 ENSP00000418675.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000495566.1Link to Ensembl Protein Viewer:ENSP00000418675.1Re-query CCDS DB by Nucleotide ID:ENST00000495566Re-query CCDS DB by Protein ID:ENSP00000418675
Original member Current member NCBI NM_001318028.2 NP_001304957.1 Accepted alive Link to Nucleotide Sequence:NM_001318028.2Link to Protein Sequence:NP_001304957.1Re-query CCDS DB by Nucleotide ID:NM_001318028Re-query CCDS DB by Protein ID:NP_001304957Link to BLAST:NP_001304957.1

Chromosomal Locations for CCDS 82805.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 72997038 72997071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 72998077 72998158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 73014915 73014983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 73015822 73015846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (210 nt):
ATGGACGTCGAGAGGCTCCAGGAGGCGCTGAAAGATTTTGAGAAGAGGGGGAAAAAGGAAGTTTGTCCTG
TCCTGGATCAGTTTCTTTGTCATGTAGCCAAGACTGGAGAAACAATGCTGGCCTCGAAACCCTGGCCTCA
AGTGATCCACCTGCCTCAACTTCCCAAACTGCGGGGATTGCAGATTAGAGACGGGGTTTCACCATGTTAG

Translation (69 aa):
MDVERLQEALKDFEKRGKKEVCPVLDQFLCHVAKTGETMLASKPWPQVIHLPQLPKLRGLQIRDGVSPC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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