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Report for CCDS62182.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
62182.1 Public Homo sapiens 17 KRT23 24 110 108 CCDS HistoryNCBI Gene:25984Re-query CCDS DB by CCDS ID:62182.1Re-query CCDS DB by GeneID:25984See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 62182.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000436344.7 ENSP00000414056.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000436344.7Link to Ensembl Protein Viewer:ENSP00000414056.3Re-query CCDS DB by Nucleotide ID:ENST00000436344Re-query CCDS DB by Protein ID:ENSP00000414056
Original member Current member NCBI NM_001282433.2 NP_001269362.1 Accepted alive Link to Nucleotide Sequence:NM_001282433.2Link to Protein Sequence:NP_001269362.1Re-query CCDS DB by Nucleotide ID:NM_001282433Re-query CCDS DB by Protein ID:NP_001269362Link to BLAST:NP_001269362.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269362.1 285 Q9C075-2 285 100% 0 0

Chromosomal Locations for CCDS 62182.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 40922989 40923083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40924472 40924503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40925354 40925574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40928238 40928360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40928446 40928607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40929940 40930096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 40931373 40931440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (858 nt):
ATGACCAATGCTCAGATTATTCTTCTCATTGACAATGCCAGGATGGCAGTGGATGACTTCAACCTCAAGT
ATGAAAATGAACACTCCTTTAAGAAAGACTTGGAAATTGAAGTCGAGGGCCTCCGAAGGACCTTAGACAA
CCTGACCATTGTCACAACAGACCTAGAACAGGAGGTGGAAGGAATGAGGAAAGAGCTCATTCTCATGAAG
AAGCACCATGAGCAGGAAATGGAGAAGCATCATGTGCCAAGTGACTTCAATGTCAATGTGAAGGTGGATA
CAGGTCCCAGGGAAGATCTGATTAAGGTCCTGGAGGATATGAGACAAGAATATGAGCTTATAATAAAGAA
GAAGCATCGAGACTTGGACACTTGGTATAAAGAACAGTCTGCAGCCATGTCCCAGGAGGCAGCCAGTCCA
GCCACTGTGCAGAGCAGACAAGGTGACATCCACGAACTGAAGCGCACATTCCAGGCCCTGGAGATTGACC
TGCAGACACAGTACAGCACGAAATCTGCTTTGGAAAACATGTTATCCGAGACCCAGTCTCGGTACTCCTG
CAAGCTCCAGGACATGCAAGAGATCATCTCCCACTATGAGGAGGAACTGACGCAGCTACGCCATGAACTG
GAGCGGCAGAACAATGAATACCAAGTGCTGCTGGGCATCAAAACCCACCTGGAGAAGGAAATCACCACGT
ACCGACGGCTCCTGGAGGGAGAGAGTGAAGGGACACGGGAAGAATCAAAGTCGAGCATGAAAGTGTCTGC
AACTCCAAAGATCAAGGCCATAACCCAGGAGACCATCAACGGAAGATTAGTTCTTTGTCAAGTGAATGAA
ATCCAAAAGCACGCATGA

Translation (285 aa):
MTNAQIILLIDNARMAVDDFNLKYENEHSFKKDLEIEVEGLRRTLDNLTIVTTDLEQEVEGMRKELILMK
KHHEQEMEKHHVPSDFNVNVKVDTGPREDLIKVLEDMRQEYELIIKKKHRDLDTWYKEQSAAMSQEAASP
ATVQSRQGDIHELKRTFQALEIDLQTQYSTKSALENMLSETQSRYSCKLQDMQEIISHYEEELTQLRHEL
ERQNNEYQVLLGIKTHLEKEITTYRRLLEGESEGTREESKSSMKVSATPKIKAITQETINGRLVLCQVNE
IQKHA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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