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Report for CCDS45016.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
45016.1 |
Public |
Homo sapiens |
13 |
ZMYM2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:7750](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:45016.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:7750](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 13 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 45016.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000382871.3 |
ENSP00000372324.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000382871.3](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000372324.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000382871](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000372324](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000382874.6 |
ENSP00000372327.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000382874.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000372327.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000382874](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000372327](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000610343.5 |
ENSP00000479904.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000610343.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000479904.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000610343](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000479904](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001190964.4 |
NP_001177893.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001190964.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001177893.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001190964](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001177893](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001177893.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001190965.4 |
NP_001177894.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001190965.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001177894.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001190965](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001177894](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001177894.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001353157.2 |
NP_001340086.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001353157.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001340086.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001353157](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001340086](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001340086.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001353159.2 |
NP_001340088.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001353159.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001340088.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001353159](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001340088](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001340088.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001353162.3 |
NP_001340091.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001353162.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001340091.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001353162](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001340091](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001340091.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001353164.2 |
NP_001340093.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001353164.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001340093.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001353164](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001340093](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001340093.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_003453.6 |
NP_003444.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_003453.6](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_003444.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_003453](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_003444](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_003444.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_197968.4 |
NP_932072.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_197968.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_932072.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_197968](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_932072](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_932072.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 45016.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4134 nt): ATGGACACAAGTTCAGTGGGAGGATTAGAATTGACTGATCAGACTCCTGTTTTATTAGGGAGTACGGCCA TGGCAACTAGTCTCACGAATGTAGGAAACTCATTTAGTGGTCCAGCTAATCCTTTAGTGTCTAGATCTAA TAAGTTTCAGAACTCGTCAGTGGAAGATGATGATGATGTTGTTTTTATCGAACCTGTACAACCTCCCCCA CCTTCTGTACCAGTGGTAGCTGATCAAAGAACCATAACATTTACATCATCAAAAAATGAAGAACTACAAG GAAATGATTCCAAAATTACTCCTTCCTCAAAAGAGTTGGCATCTCAGAAGGGAAGTGTAAGTGAGACAAT TGTCATTGATGATGAAGAGGACATGGAAACAAATCAAGGGCAAGAGAAAAATTCCTCCAATTTTATTGAA CGAAGACCTCCTGAGACTAAAAACAGAACCAATGATGTGGATTTCTCCACTTCCAGTTTTTCAAGAAGTA AGGTAAATGCAGGAATGGGTAATAGTGGTATCACCACAGAACCAGACTCTGAAATTCAGATTGCTAATGT TACAACTTTAGAAACAGGTGTAAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACGGGCGAGATATG AACTTAATGATTACACATGTAACATCACTGCAGAATACCAACTTGGGAGATGTCTCTAACGGACTGCAGT CAAGTAATTTTGGTGTTAATATACAAACATACACCCCATCTTTAACTTCACAGACCAAGACTGGAGTAGG ACCTTTTAATCCTGGTAGAATGAATGTGGCAGGAGACGTTTTTCAGAATGGAGAATCTGCAACTCATCAT AATCCTGATTCTTGGATCTCCCAGTCAGCTTCATTTCCCCGTAATCAGAAACAACCAGGGGTGGACTCTT TATCACCAGTGGCCTCACTTCCTAAACAGATTTTCCAGCCGTCTGTCCAACAGCAGCCTACTAAACCAGT TAAAGTCACTTGTGCAAACTGCAAAAAACCTTTACAGAAGGGCCAGACAGCTTATCAACGAAAAGGATCA GCTCACCTCTTTTGTTCTACCACCTGCCTTTCTTCCTTCTCCCACAAGCCTGCTCCAAAGAAACTCTGTG TTATGTGTAAAAAAGATATAACTACAATGAAAGGAACCATTGTTGCTCAAGTGGATTCAAGTGAGTCCTT CCAGGAATTCTGTAGTACATCTTGTTTATCTCTCTATGAAGACAAACAGAATCCTACTAAAGGAGCTCTA AATAAATCAAGATGTACAATCTGTGGTAAACTAACTGAGATTCGCCATGAAGTCAGCTTTAAAAATATGA CTCATAAGCTGTGCAGTGACCACTGCTTTAATAGATATAGAATGGCCAATGGTTTAATAATGAATTGCTG TGAACAGTGTGGAGAGTACTTGCCCAGTAAAGGTGCTGGAAATAATGTTCTGGTGATTGATGGTCAACAG AAAAGATTTTGCTGTCAAAGTTGTGTCAGTGAATACAAACAGGTAGGTAGCCATCCAAGCTTCCTGAAGG AGGTTCGAGATCACATGCAGGACTCTTTCTTAATGCAGCCTGAGAAATATGGAAAACTGACAACTTGTAC TGGTTGCCGAACACAGTGCAGGTTTTTTGATATGACTCAGTGTATAGGTCCTAATGGATATATGGAGCCA TATTGTTCAACTGCTTGTATGAACAGTCACAAGACAAAATATGCAAAATCACAAAGTTTGGGAATTATTT GCCATTTTTGTAAGCGAAACTCTTTACCTCAATACCAAGCCACAATGCCTGATGGAAAACTGTACAACTT TTGCAATTCCAGTTGTGTGGCTAAATTTCAGGCTCTAAGTATGCAGTCATCTCCAAATGGCCAGTTTGTA GCGCCAAGTGATATTCAGTTGAAATGCAACTACTGCAAAAATTCCTTTTGTTCAAAACCAGAAATCCTGG AATGGGAGAACAAAGTGCATCAGTTCTGCAGCAAAACTTGTTCAGATGACTATAAGAAGTTGCATTGCAT AGTTACATATTGCGAATACTGTCAAGAGGAGAAGACTCTTCATGAAACAGTAAATTTCTCTGGCGTTAAG AGACCTTTCTGTAGTGAAGGCTGCAAATTATTATACAAACAGGATTTTGCCAGACGTTTAGGATTGAGAT GTGTTACTTGCAACTATTGTTCTCAGCTATGTAAGAAGGGAGCAACTAAAGAACTCGATGGTGTTGTGAG AGATTTCTGCAGTGAAGATTGCTGTAAAAAATTTCAGGATTGGTACTACAAGGCTGCAAGGTGTGACTGT TGTAAATCTCAAGGAACTCTTAAAGAGCGAGTTCAGTGGCGTGGGGAAATGAAACATTTCTGTGATCAAC ATTGCTTACTGCGTTTCTACTGTCAACAAAATGAGCCCAACATGACAACTCAGAAAGGACCTGAAAACTT ACATTATGATCAGGGTTGTCAGACATCTCGAACCAAAATGACAGGTTCAGCACCACCCCCTTCTCCAACA CCTAACAAAGAGATGAAGAACAAAGCAGTTCTTTGCAAACCTTTAACAATGACAAAAGCTACTTACTGTA AACCTCACATGCAGACCAAATCTTGTCAGACAGATGATACTTGGAGGACAGAATATGTTCCAGTGCCTAT CCCTGTGCCTGTGTATATCCCAGTTCCTATGCACATGTACAGTCAGAATATTCCTGTTCCTACTACAGTT CCTGTTCCTGTGCCAGTTCCTGTTTTTCTGCCTGCTCCATTGGACAGCAGTGAGAAGATTCCTGCAGCAA TTGAGGAGCTAAAAAGCAAGGTTTCTTCAGATGCTCTTGATACAGAGTTGCTTACAATGACGGATATGAT GAGTGAAGACGAGGGGAAAACAGAGACAACCAACATCAACAGTGTAATTATTGAAACAGATATAATTGGT TCAGACCTTTTGAAGAACTCTGACCCAGAGACACAGTCCAGCATGCCTGATGTACCATATGAACCAGATT TGGATATCGAAATAGATTTTCCCAGAGCTGCTGAGGAGCTTGATATGGAAAATGAATTTTTATTACCACC TGTTTTTGGCGAAGAATATGAGGAACAGCCCAGACCTCGATCTAAAAAAAAGGGAGCCAAGAGAAAGGCT GTATCAGGATACCAGTCTCATGATGATAGTTCTGACAATTCAGAATGCAGCTTTCCTTTCAAATATACGT ATGGCGTAAATGCATGGAAACACTGGGTCAAAACTAGGCAACTTGATGAAGATCTTCTGGTATTAGATGA GTTAAAATCTTCTAAATCAGTAAAGTTAAAAGAGGATCTACTCTCTCACACCACAGCTGAGCTTAACTAT GGGTTAGCTCATTTTGTCAATGAGATCCGACGGCCAAATGGAGAGAATTATGCACCTGACAGCATCTATT ACCTTTGCCTTGGAATACAGGAGTATTTGTGTGGAAGTAATCGAAAAGACAACATATTTATTGATCCTGG ATACCAAACATTTGAGCAAGAATTGAATAAAATACTGCGAAGCTGGCAACCAAGCATACTTCCAGATGGG TCAATATTCTCTCGAGTTGAAGAAGACTATCTCTGGAGGATAAAACAACTAGGATCACACTCTCCAGTAG CTCTTCTGAATACACTGTTCTACTTTAACACTAAGTATTTTGGCCTGAAAACAGTGGAACAACACTTAAG ACTTTCCTTTGGCACTGTGTTTAGGCATTGGAAAAAAAATCCTTTAACGATGGAAAACAAAGCGTGTCTT CGATACCAAGTGTCTTCCTTGTGTGGAACAGATAATGAAGATAAAATTACTACTGGAAAAAGAAAACATG AAGATGATGAGCCAGTATTTGAACAAATTGAAAACACAGCCAATCCTTCCAGATGTCCTGTGAAAATGTT TGAATGCTACTTGTCTAAAAGTCCACAGAATCTTAATCAGAGGATGGATGTTTTTTATTTGCAACCAGAA TGCTCTAGTTCTACAGATAGCCCTGTCTGGTATACGTCTACTTCACTGGACCGAAACACCTTGGAAAATA TGCTTGTACGGGTTCTTCTAGTAAAAGATATTTATGATAAAGACAATTATGAACTGGATGAAGACACAGA CTAA
Translation (1377 aa): MDTSSVGGLELTDQTPVLLGSTAMATSLTNVGNSFSGPANPLVSRSNKFQNSSVEDDDDVVFIEPVQPPP PSVPVVADQRTITFTSSKNEELQGNDSKITPSSKELASQKGSVSETIVIDDEEDMETNQGQEKNSSNFIE RRPPETKNRTNDVDFSTSSFSRSKVNAGMGNSGITTEPDSEIQIANVTTLETGVSSVNDGQLENTDGRDM NLMITHVTSLQNTNLGDVSNGLQSSNFGVNIQTYTPSLTSQTKTGVGPFNPGRMNVAGDVFQNGESATHH NPDSWISQSASFPRNQKQPGVDSLSPVASLPKQIFQPSVQQQPTKPVKVTCANCKKPLQKGQTAYQRKGS AHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQNPTKGAL NKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLVIDGQQ KRFCCQSCVSEYKQVGSHPSFLKEVRDHMQDSFLMQPEKYGKLTTCTGCRTQCRFFDMTQCIGPNGYMEP YCSTACMNSHKTKYAKSQSLGIICHFCKRNSLPQYQATMPDGKLYNFCNSSCVAKFQALSMQSSPNGQFV APSDIQLKCNYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVK RPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGATKELDGVVRDFCSEDCCKKFQDWYYKAARCDC CKSQGTLKERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSAPPPSPT PNKEMKNKAVLCKPLTMTKATYCKPHMQTKSCQTDDTWRTEYVPVPIPVPVYIPVPMHMYSQNIPVPTTV PVPVPVPVFLPAPLDSSEKIPAAIEELKSKVSSDALDTELLTMTDMMSEDEGKTETTNINSVIIETDIIG SDLLKNSDPETQSSMPDVPYEPDLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKA VSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVKTRQLDEDLLVLDELKSSKSVKLKEDLLSHTTAELNY GLAHFVNEIRRPNGENYAPDSIYYLCLGIQEYLCGSNRKDNIFIDPGYQTFEQELNKILRSWQPSILPDG SIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKKNPLTMENKACL RYQVSSLCGTDNEDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPE CSSSTDSPVWYTSTSLDRNTLENMLVRVLLVKDIYDKDNYELDEDTD
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