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Report for CCDS55476.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55476.1 Public Homo sapiens X AMMECR1 24 110 108 CCDS HistoryNCBI Gene:9949Re-query CCDS DB by CCDS ID:55476.1Re-query CCDS DB by GeneID:9949See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55476.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372057.1 ENSP00000361127.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372057.1Link to Ensembl Protein Viewer:ENSP00000361127.1Re-query CCDS DB by Nucleotide ID:ENST00000372057Re-query CCDS DB by Protein ID:ENSP00000361127
Original member Current member NCBI NM_001171689.2 NP_001165160.1 Accepted alive Link to Nucleotide Sequence:NM_001171689.2Link to Protein Sequence:NP_001165160.1Re-query CCDS DB by Nucleotide ID:NM_001171689Re-query CCDS DB by Protein ID:NP_001165160Link to BLAST:NP_001165160.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001165160.1 210 Q9Y4X0-4 210 100% 0 0

Chromosomal Locations for CCDS 55476.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 110198520 110198634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110200954 110201050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110202446 110202536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110216518 110216632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110264489 110264599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 110317599 110317702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGGTGGTGTCAGCAGAGATGTGCTGCTTTTGCTTCGATGTGCTCTACTGTCACCTGTATGGATACCAGC
AGCCCCGGACCCCCCGATTCACCAACGAGCCCTACCCACTGTTTGTAACATGGAAGATTGGTCGAGACAA
AAGATTACGTGGATGCATAGGTACTTTTTCTGCCATGAATTTGCATTCAGGACTCAGGGAGTACACACTT
ACCAGTGCCCTTAAAGATAGCCGTTTTCCCCCAATGACAAGGGATGAGCTGCCACGGCTTTTCTGCTCAG
TGTCTCTGCTCACTAACTTTGAAGATGTCTGTGATTATTTGGACTGGGAGGTGGGTGTACATGGCATTAG
AATAGAATTCATCAATGAAAAAGGATCAAAACGCACCGCCACCTACCTACCGGAGGTTGCAAAGGAGCAA
GGATGGGACCATATACAGACCATAGACTCCTTATTGAGGAAAGGAGGATACAAAGCTCCGATTACTAATG
AATTCAGGAAAACCATAAAACTGACCAGGTATCGTAGTGAAAAGATGACCCTGAGCTATGCTGAATACCT
TGCTCATCGCCAGCATCATCATTTCCAAAATGGCATTGGGCATCCCCTTCCGCCATACAACCATTATTCC
TGA

Translation (210 aa):
MVVSAEMCCFCFDVLYCHLYGYQQPRTPRFTNEPYPLFVTWKIGRDKRLRGCIGTFSAMNLHSGLREYTL
TSALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGIRIEFINEKGSKRTATYLPEVAKEQ
GWDHIQTIDSLLRKGGYKAPITNEFRKTIKLTRYRSEKMTLSYAEYLAHRQHHHFQNGIGHPLPPYNHYS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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