NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32534.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32534.1 Public Homo sapiens 17 GLTPD2 24 110 108 CCDS HistoryNCBI Gene:388323Re-query CCDS DB by CCDS ID:32534.1Re-query CCDS DB by GeneID:388323See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32534.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331264.8 ENSP00000328070.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331264.8Link to Ensembl Protein Viewer:ENSP00000328070.7Re-query CCDS DB by Nucleotide ID:ENST00000331264Re-query CCDS DB by Protein ID:ENSP00000328070
Original member Current member NCBI NM_001014985.3 NP_001014985.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001014985.3Link to Protein Sequence:NP_001014985.3Re-query CCDS DB by Nucleotide ID:NM_001014985Re-query CCDS DB by Protein ID:NP_001014985Link to BLAST:NP_001014985.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001014985.3 291 A6NH11 291 100% 0 0

Chromosomal Locations for CCDS 32534.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4789012 4789117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4789226 4789290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4789511 4789677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4789759 4790296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (876 nt):
ATGGGAGTGGCGGCGCGGCCCCCAGCCCTGCGGCACTGGTTCAGCCACTCAATTCCTCTCGCTATCTTCG
CGCTGCTGCTGCTTTATCTCAGTGTTCGGAGCCTAGGCGCCCGCTCGGGCTGCGGACCCAGGGCGCAGCC
CTGCGTTCCAGGGGAAACGGCGCCCTTCCAGGTCCGGCAGGAGTCGGGAACCCTGGAGGCCCCGGAGAGG
AAACAGCCTCCGTGTCTGGGCCCTCGGGGGATGCTGGGCCGCATGATGAGGCGGTTCCACGCCAGTCTGA
AACCCGAAGGGGATGTGGGGCTGTCGCCGTACCTGGCGGGATGGAGGGCACTCGTCGAGTTCCTGACTCC
CCTCGGCTCCGTCTTCGCCTTCGCCACTAGGGAGGCCTTCACCAAGGTGACAGACCTGGAGGCTCGGGTG
CACGGCCCGGACGCGGAGCACTACTGGTCGCTGGTGGCCATGGCGGCGTGGGAGCGGAGGGCGGGACTGC
TGGAGCAGCCGGGGGCGGCCCCCCGGGACCCGACCCGGAGCTCGGGCTCTCGCACGCTGCTCCTGCTGCA
CCGCGCGCTGCGCTGGTCCCAGCTCTGCCTCCACCGGGTGGCGACCGGCGCGCTGGGAGGCCCGGACGCG
GGCGTGCAGTGCAGCGACGCCTACCGTGCGGCCCTGGGTCCGCATCACCCCTGGCTGGTCCGACAGACCG
CCCGCCTCGCCTTCCTCGCCTTCCCGGGTCGCCGCCGCCTGCTGGAGCTGGCGTGTCCCGGAGCCACCGA
GGCGGAGGCGCGGGCCGCGCTGGTCCGGGCCGCCGGCACCTTGGAGGATGTCTACAACCGCACCCAGAGC
CTGCTGGCCGAGCGCGGCCTGCTCCAGCTGGCCTAA

Translation (291 aa):
MGVAARPPALRHWFSHSIPLAIFALLLLYLSVRSLGARSGCGPRAQPCVPGETAPFQVRQESGTLEAPER
KQPPCLGPRGMLGRMMRRFHASLKPEGDVGLSPYLAGWRALVEFLTPLGSVFAFATREAFTKVTDLEARV
HGPDAEHYWSLVAMAAWERRAGLLEQPGAAPRDPTRSSGSRTLLLLHRALRWSQLCLHRVATGALGGPDA
GVQCSDAYRAALGPHHPWLVRQTARLAFLAFPGRRRLLELACPGATEAEARAALVRAAGTLEDVYNRTQS
LLAERGLLQLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH