CCDS Report for Consensus CDS

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Report for CCDS91675.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
91675.1	Public	Homo sapiens	12	CAPRIN2	24	110	108

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91675.1

Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status
EBI	ENST00000686317.1	ENSP00000509126.1	Accepted	alive
NCBI	NM_001385514.1	NP_001372443.1	Accepted	alive
NCBI	NM_001385515.1	NP_001372444.1	Accepted	alive

Chromosomal Locations for CCDS 91675.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)

Genome Browser links:

Chromosome	Start	Stop
12	30709902	30710470
12	30711566	30711629
12	30713785	30713885
12	30714959	30715141
12	30716508	30716676
12	30723259	30723314
12	30724370	30724451
12	30725966	30726088
12	30728648	30729325
12	30730239	30730282
12	30731343	30731510
12	30733629	30733711
12	30734968	30735206
12	30741020	30741106
12	30751071	30751133
12	30753344	30753520

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2886 nt):
ATGAAGTCAGCCAAGCCCCAAGTGAACCACAGTCAGCATGGGGAAAGCCAGCGGGCCTTGAGCCCCCTGC AGTCTACTCTGAGTTCTGCTGCATCTCCTTCCCAAGCGTATGAGACCTATATTGAAAATGGACTCATATG CCTTAAACACAAAATTAGAAACATCGAGAAAAAGAAGCTCAAACTGGAGGATTATAAGGATCGCCTGAAA AGTGGAGAGCATCTTAATCCAGACCAGTTGGAAGCTGTAGAGAAATATGAAGAAGTGCTACATAATTTGG AATTTGCCAAGGAGCTTCAAAAAACCTTTTCTGGGTTGAGCCTAGATCTACTAAAAGCGCAAAAGAAGGC CCAGAGAAGGGAGCACATGCTAAAACTTGAGGCTGAGAAGAAAAAGCTTCGAACTATACTTCAAGTTCAG TATGTATTGCAGAACTTGACACAGGAGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGGTGCAGTGT ATTTGCCTTCAAAAGAACTTGACTACCTCATTAAGTTTTCAAAACTGACCTGCCCTGAAAGAAATGAAAG TCTGAGTGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGGGACCTTTTGGAAGGTAGTGAGAAA GCAGTGGTAGGAACGACATACAAACACTTGAAGGATCTACTGTCTAAATTGCTGAACTCAGGCTATTTTG AAAGTATCCCAGTTCCCAAAAATGCCAAGGAAAAGGAAGTACCACTGGAGGAAGAAATGCTAATACAATC AGAGAAAAAAACACAATTATCGAAGACTGAATCTGTCAAAGAGTCAGAGTCTCTAATGGAATTTGCCCAG CCAGAGATACAACCACAAGAGTTTCTTAACAGACGCTATATGACAGAAGTAGATTATTCAAACAAACAAG GCGAAGAGCAACCTTGGGAAGCAGATTATGCTAGAAAACCAAATCTCCCAAAACGTTGGGATATGCTTAC TGAACCAGATGGTCAAGAGAAGAAACAGGAGTCCTTTAAGTCCTGGGAGGCTTCTGGTAAGCACCAGGAG GTATCCAAGCCTGCAGTTTCCTTAGAACAGAGGAAACAAGACACCTCAAAACTCAGGTCTACTCTGCCGG AAGAGCAGAAGAAGCAGGAGATCTCCAAATCCAAGCCATCTCCTAGCCAGTGGAAGCAAGATACACCTAA ATCCAAAGCAGGGTATGTTCAAGAGGAACAAAAGAAACAGGAGACACCAAAGCTGTGGCCAGTTCAGCTG CAGAAAGAACAAGATCCAAAGAAGCAAACTCCAAAGTCTTGGACACCTTCCATGCAGAGCGAACAGAACA CCACCAAGTCATGGACCACTCCCATGTGTGAAGAACAGGATTCAAAACAGCCAGAGACTCCAAAATCCTG GGAAAACAATGTTGAGAGTCAAAAACACTCTTTAACATCACAGTCACAGATTTCTCCAAAGTCCTGGGGA GTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCCAGGAAGTTGAACACAGAACCCAAAGATG TGCCTAAGCCTGTGCATCAGCCTGTAGGTTCTTCCTCTACCCTTCCGAAGGATCCAGTATTGAGGAAAGA AAAACTGCAGGATCTGATGACTCAGATTCAAGGAACTTGTAACTTTATGCAAGAGTCTGTTCTTGACTTT GACAAACCTTCAAGTGCAATTCCAACGTCACAACCGCCTTCAGCTACTCCAGGTAGCCCCGTAGCATCTA AAGAACAAAATCTGTCCAGTCAAAGTGATTTTCTTCAAGAGCCGTTACAGGTATTTAACGTTAATGCACC TCTGCCTCCACGAAAAGAACAAGAAATAAAAGAATCCCCTTATTCACCTGGCTACAATCAAAGTTTTACC ACAGCAAGTACACAAACACCACCCCAGTGCCAACTGCCATCTATACATGTAGAACAAACTGTCCATTCTC AAGAGACTGCAAATTATCATCCTGATGGAACTATTCAAGTAAGCAATGGTAGCCTTGCCTTTTACCCAGC ACAGACGAATGTGTTTCCCAGACCTACTCAGCCATTTGTCAATAGCCGGGGATCTGTTAGAGGATGTACT CGTGGTGGGAGATTAATAACCAATTCCTATCGGTCCCCTGGTGGTTATAAAGGTTTTGATACTTATAGAG GACTCCCTTCAATTTCCAATGGAAATTATAGCCAGCTGCAGTTCCAAGCTAGAGAGTATTCTGGAGCACC TTATTCCCAAAGGGATAATTTCCAGCAGTGTTATAAGCGAGGAGGGACATCTGGTGGTCCACGAGCAAAT TCGAGAGCAGGGTGGAGTGATTCTTCTCAGGTGAGCAGCCCAGAAAGAGACAACGAAACCTTTAACAGTG GTGACTCTGGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAATCCAGCAGCCAC CATACTGCCAGTACACGTCTACCCTCTGCCTCAGCAGATGCGAGTTGCCTTCTCAGCAGCCAGAACCTCT AATCTGGCCCCTGGAACTTTAGACCAACCTATTGTGTTTGATCTTCTTCTGAACAACTTAGGAGAAACTT TTGATCTTCAGCTTGGTAGATTTAATTGCCCAGTGAATGGCACTTACGTTTTCATTTTTCACATGCTAAA GCTGGCAGTGAATGTGCCACTGTATGTCAACCTCATGAAGAATGAAGAGGTCTTGGTATCAGCCTATGCC AATGATGGTGCTCCAGACCATGAAACTGCTAGCAATCATGCAATTCTTCAGCTCTTCCAGGGAGACCAGA TATGGTTACGTCTGCACAGGGGAGCAATTTATGGAAGTAGCTGGAAATATTCTACGTTTTCAGGCTATCT TCTTTATCAAGATTGA
Translation (961 aa):
MKSAKPQVNHSQHGESQRALSPLQSTLSSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLK SGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSLDLLKAQKKAQRREHMLKLEAEKKKLRTILQVQ YVLQNLTQEHVQKDFKGGLNGAVYLPSKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEK AVVGTTYKHLKDLLSKLLNSGYFESIPVPKNAKEKEVPLEEEMLIQSEKKTQLSKTESVKESESLMEFAQ PEIQPQEFLNRRYMTEVDYSNKQGEEQPWEADYARKPNLPKRWDMLTEPDGQEKKQESFKSWEASGKHQE VSKPAVSLEQRKQDTSKLRSTLPEEQKKQEISKSKPSPSQWKQDTPKSKAGYVQEEQKKQETPKLWPVQL QKEQDPKKQTPKSWTPSMQSEQNTTKSWTTPMCEEQDSKQPETPKSWENNVESQKHSLTSQSQISPKSWG VATASLIPNDQLLPRKLNTEPKDVPKPVHQPVGSSSTLPKDPVLRKEKLQDLMTQIQGTCNFMQESVLDF DKPSSAIPTSQPPSATPGSPVASKEQNLSSQSDFLQEPLQVFNVNAPLPPRKEQEIKESPYSPGYNQSFT TASTQTPPQCQLPSIHVEQTVHSQETANYHPDGTIQVSNGSLAFYPAQTNVFPRPTQPFVNSRGSVRGCT RGGRLITNSYRSPGGYKGFDTYRGLPSISNGNYSQLQFQAREYSGAPYSQRDNFQQCYKRGGTSGGPRAN SRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPVTNPAATILPVHVYPLPQQMRVAFSAARTS NLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYA NDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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