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Report for CCDS76124.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76124.1 Public Homo sapiens 1 CNKSR1 24 110 108 CCDS HistoryNCBI Gene:10256Re-query CCDS DB by CCDS ID:76124.1Re-query CCDS DB by GeneID:10256See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76124.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000531191.5 ENSP00000431817.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000531191.5Link to Ensembl Protein Viewer:ENSP00000431817.1Re-query CCDS DB by Nucleotide ID:ENST00000531191Re-query CCDS DB by Protein ID:ENSP00000431817
Original member Current member NCBI NM_001297648.2 NP_001284577.1 Accepted alive Link to Nucleotide Sequence:NM_001297648.2Link to Protein Sequence:NP_001284577.1Re-query CCDS DB by Nucleotide ID:NM_001297648Re-query CCDS DB by Protein ID:NP_001284577Link to BLAST:NP_001284577.1

Chromosomal Locations for CCDS 76124.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 26183750 26183830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26184071 26184141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26184214 26184287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26184401 26184507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26184585 26184612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26185014 26185186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26187168 26187241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26187411 26187482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26188234 26188307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26188442 26188503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26188598 26188697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26188772 26188953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26189279 26189548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1368 nt):
ATGGTGAGGGAACTGCTGCGGGAGCCAGCCGGACTCAGCTTAGTGCTGAAGAAGATCCCGATACCGGAGA
CCCCCCCACAGACGCCCCCTCAGGTCCTGGACTCCCCGCACCAGAGGAGCCCATCACTGTCTCTGGCCCC
ACTGTCTCCCAGGGCCCCATCTGAAGACGTCTTTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGACCC
AGCCCTGCCTGGACAGACTCTGCCTCCCTTGGCCCTGAGCCCCTGCCCATCCCCCCGGAACCCCCAGCCA
TACTCCCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAA
GAAATCAAAAGGCCTGGCGACCCGGCTGAGCCGCCGGCGGGTGTCATGCCGTGAGCTGGGCCGGCCGGAC
TGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTTCATGGGCCCGCGCTGGCGCCGCCGCTGGT
TTGTGCTCAAGGGACACACGCTCTACTGGTACCGCCAGCCCCAGGATGAGAAGGCTGAGGGCCTCATCAA
TGTCTCCAACTATAGTCTGGAAAGTGGACATGATCAGAAGAAGAAATATGTGTTTCAGCTCACCCATGAT
GTGTACAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCTGAGCATGTGGGTGCGTCATCTCATTA
CCTGCATCTCCAAGTACCAGTCTCCAGGCCGGGCCCCCCCACCCCGAGAGGAAGACTGCTACAGTGAGAC
CGAAGCAGAGGACCCGGACGATGAGGCTGGGTCCCACTCAGCCTCGCCCAGCCCTGCTCAAGCTGGGAGT
CCCCTCCATGGAGACACATCACCTGCAGCCACCCCCACACAGCGCAGCCCACGGACCTCCTTTGGCTCTC
TGACAGACAGCAGTGAAGAGGCACTGGAAGGAATGGTACGGGGGCTGAGGCAGGGTGGCGTGTCCCTCCT
AGGCCAGCCACAGCCCCTGACCCAGGAACAGTGGCGGAGCTCTTTCATGCGGCGCAACCGAGACCCTCAG
CTCAATGAGCGAGTGCACCGTGTGCGGGCGCTACAGAGCACACTCAAGGCAAAGCTGCAGGAGCTGCAGG
TCCTAGAAGAAGTGCTGGGTGACCCTGAGCTGACAGGAGAGAAGTTCCGCCAGTGGAAGGAGCAGAACCG
GGAGCTGTACTCAGAGGGCCTGGGGGCCTGGGGAGTGGCACAGGCTGAAGGCAGCTCCCACATCTTGACC
TCTGACTCCACAGAACAGTCCCCCCACTCCCTGCCCTCTGACCCTGAAGAGCACTCCCATCTCTGCCCCC
TGACCTCAGAGAGCAGCCTCCGACCTCCTGACCTCTGA

Translation (455 aa):
MVRELLREPAGLSLVLKKIPIPETPPQTPPQVLDSPHQRSPSLSLAPLSPRAPSEDVFAFDLSSNPSPGP
SPAWTDSASLGPEPLPIPPEPPAILPAGVAGTPGLPESPDKSPVGRKKSKGLATRLSRRRVSCRELGRPD
CDGWLLLRKAPGGFMGPRWRRRWFVLKGHTLYWYRQPQDEKAEGLINVSNYSLESGHDQKKKYVFQLTHD
VYKPFIFAADTLTDLSMWVRHLITCISKYQSPGRAPPPREEDCYSETEAEDPDDEAGSHSASPSPAQAGS
PLHGDTSPAATPTQRSPRTSFGSLTDSSEEALEGMVRGLRQGGVSLLGQPQPLTQEQWRSSFMRRNRDPQ
LNERVHRVRALQSTLKAKLQELQVLEEVLGDPELTGEKFRQWKEQNRELYSEGLGAWGVAQAEGSSHILT
SDSTEQSPHSLPSDPEEHSHLCPLTSESSLRPPDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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