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Report for CCDS75497.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75497.1 Public Homo sapiens 6 ASCC3 24 110 108 CCDS HistoryNCBI Gene:10973Re-query CCDS DB by CCDS ID:75497.1Re-query CCDS DB by GeneID:10973See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75497.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000522650.5 ENSP00000430769.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000522650.5Link to Ensembl Protein Viewer:ENSP00000430769.1Re-query CCDS DB by Nucleotide ID:ENST00000522650Re-query CCDS DB by Protein ID:ENSP00000430769
Original member Current member NCBI NM_001284271.2 NP_001271200.1 Accepted alive Link to Nucleotide Sequence:NM_001284271.2Link to Protein Sequence:NP_001271200.1Re-query CCDS DB by Nucleotide ID:NM_001284271Re-query CCDS DB by Protein ID:NP_001271200Link to BLAST:NP_001271200.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271200.1 731 Q8N3C0-4 731 100% 0 0

Chromosomal Locations for CCDS 75497.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 100715417 100715533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 100718075 100718251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 100725539 100725703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 100766565 100766705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 100767145 100767345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 100798713 100798838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 100799431 100799572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 100800300 100800504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 100805760 100805880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 100848148 100848707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 100864064 100864214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 100867908 100867997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2196 nt):
ATGGCTTTACCTCGTCTCACAGGAGCCTTGCGTTCCTTTTCAAATGTCACCAAGCAAGATAATTATAATG
AAGAAGTGGCTGACTTAAAGATAAAGCGATCTAAACTTCATGAACAAGTTTTAGATTTGGGCCTGACATG
GAAGAAGATAATAAAATTTTTGAATGAAAAACTGGAGAAGAGTAAAATGCAAAGTATAAATGAAGACTTA
AAAGATATATTACATGCTGCAAAGCAGATAGTTGGAACTGATAATGGGAGAGAAGCAATTGAAAGTGGGG
CTGCATTTCTCTTCATGACATTTCACTTGAAGGACTCTGTTGGTCACAAGGAAACAAAGGCTATCAAACA
GATGTTTGGCCCCTTTCCTTCATCATCTGCCACTGCAGCTTGTAATGCTACTAATCGAATTATTTCTCAT
TTTAGTCAAGATGATCTTACTGCTCTTGTGCAGATGACAGAAAAAGAACATGGCGATAGGGTTTTTTTTG
GTAAAAATTTAGCATTTTCATTTGACATGCATGATTTGGACCACTTTGACGAACTGCCAATAAATGGTGA
AACTCAGAAAACTATAAGCCTAGATTATAAGAAGTTTCTGAATGAACATCTCCAGGAGGCTTGCACCCCA
GAACTCAAGCCTGTGGAAAAAACAAATGGCTCCTTTTTGTGGTGTGAAGTTGAAAAGTACCTAAATTCAA
CTTTGAAGGAAATGACTGAAGTGCCAAGAGTAGAAGATCTTTGCTGTACTTTATATGATATGCTTGCTTC
TATTAAAAGTGGTGATGAACTTCAGGATGAGCTATTTGAACTGCTGGGACCTGAAGGACTTGAACTTATT
GAGAAACTCCTCCAGAACAGAATTACAATTGTGGATAGATTTCTTAATTCTTCAAATGATCATAGGTTTC
AGGCTCTTCAAGACAATTGTAAAAAAATTTTAGGAGAAAATGCTAAACCCAATTATGGTTGTCAAGTCAC
TATTCAGTCTGAACAAGAAAAGCAGTTAATGAAACAATATCGACGTGAAGAAAAAAGAATTGCCAGACGA
GAAAAAAAGGCTGGAGAAGATTTAGAAGTTTCAGAAGGACTTATGTGCTTTGATCCTAAGGAATTGCGGA
TACAAAGAGAACAGGCACTTCTGAATGCTAGAAGTGTTCCAATTCTGAGCAGGCAGAGAGATGCAGACGT
TGAAAAAATACATTATCCCCATGTGTATGATTCCCAGGCTGAAGCCATGAAAACATCAGCATTTATTGCT
GGTGCAAAGATGATTTTGCCAGAAGGAATCCAAAGAGAGAATAACAAGCTTTATGAAGAAGTAAGGATTC
CCTACAGCGAACCAATGCCACTCAGCTTTGAGGAAAAGCCAGTTTATATCCAAGACTTAGATGAGATCGG
ACAGCTGGCTTTTAAAGGAATGAAGAGACTCAATAGAATCCAGTCAATAGTGTTTGAGACTGCCTACAAC
ACCAATGAGAACATGCTGATTTGTGCCCCTACAGGAGCTGGAAAAACCAACATTGCAATGCTGACAGTCT
TGCATGAAATTCGCCAACATTTTCAACAAGGTGTTATCAAAAAGAATGAATTTAAGATTGTATATGTTGC
TCCAATGAAAGCCTTGGCAGCTGAAATGACAGATTACTTCAGCAGACGTCTAGAGCCACTAGGCATCATT
GTGAAAGAATTGACTGGTGACATGCAGTTGTCCAAAAGTGAAATTTTACGAACTCAGATGCTTGTGACCA
CACCAGAAAAATGGGATGTAGTGACAAGAAAGAGTGTTGGGGATGTAGCTCTTTCCCAGATTGTAAGGCT
CCTTATTCTTGATGAAGTTCATTTGCTGCATGAAGATAGAGGACCAGTATTAGAAAGCATAGTTGCCCGT
ACTTTACGGCAGGTGGAATCCACACAGAGTATGATAAGGATTCTCGGACTGTCTGCAACTTTACCTAACT
ACCTCGATGTTGCCACATTTTTACATGTTAATCCATACATTGGACTTTTCTTCTTTGATGGCCGTTTTCG
ACCAGTACCTCTTGGACAGACATTTTTGGGGATTAAATGTGCAAATAAGATGCAGCAGTTGAATAACATG
GATGAAGTATGTTATGAAAATGTTTTGAAGCAAGTAAAGGCTGGACACCAGGTACACTTATTTTATCTGC
TTTTACACTTATTTATCTGCTTTTAG

Translation (731 aa):
MALPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEKSKMQSINEDL
KDILHAAKQIVGTDNGREAIESGAAFLFMTFHLKDSVGHKETKAIKQMFGPFPSSSATAACNATNRIISH
FSQDDLTALVQMTEKEHGDRVFFGKNLAFSFDMHDLDHFDELPINGETQKTISLDYKKFLNEHLQEACTP
ELKPVEKTNGSFLWCEVEKYLNSTLKEMTEVPRVEDLCCTLYDMLASIKSGDELQDELFELLGPEGLELI
EKLLQNRITIVDRFLNSSNDHRFQALQDNCKKILGENAKPNYGCQVTIQSEQEKQLMKQYRREEKRIARR
EKKAGEDLEVSEGLMCFDPKELRIQREQALLNARSVPILSRQRDADVEKIHYPHVYDSQAEAMKTSAFIA
GAKMILPEGIQRENNKLYEEVRIPYSEPMPLSFEEKPVYIQDLDEIGQLAFKGMKRLNRIQSIVFETAYN
TNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTDYFSRRLEPLGII
VKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVRLLILDEVHLLHEDRGPVLESIVAR
TLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFFFDGRFRPVPLGQTFLGIKCANKMQQLNNM
DEVCYENVLKQVKAGHQVHLFYLLLHLFICF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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