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Report for CCDS2997.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2997.1 Public Homo sapiens 3 GPR156 24 110 108 CCDS HistoryNCBI Gene:165829Re-query CCDS DB by CCDS ID:2997.1Re-query CCDS DB by GeneID:165829See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2997.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000464295.6 ENSP00000417261.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000464295.6Link to Ensembl Protein Viewer:ENSP00000417261.1Re-query CCDS DB by Nucleotide ID:ENST00000464295Re-query CCDS DB by Protein ID:ENSP00000417261
Original member Current member NCBI NM_153002.3 NP_694547.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153002.3Link to Protein Sequence:NP_694547.2Re-query CCDS DB by Nucleotide ID:NM_153002Re-query CCDS DB by Protein ID:NP_694547Link to BLAST:NP_694547.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694547.2 814 Q8NFN8-1 814 100% 0 0

Chromosomal Locations for CCDS 2997.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 120167032 120168384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120173312 120173470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120181125 120181361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120185299 120185394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120186658 120186783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120192939 120193049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120193295 120193424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120243640 120243776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120244003 120244098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2445 nt):
ATGGAGCCTGAAATAAACTGCTCTGAATTGTGTGACAGTTTTCCTGGCCAGGAGCTGGATCGGAGACCCC
TTCATGATCTCTGCAAGACAACAATTACATCTTCCCACCACAGCAGTAAGACCATCTCTTCATTATCTCC
TGTCCTCTTGGGTATTGTTTGGACTTTTCTCAGCTGTGGACTTCTGCTGATACTTTTCTTTCTTGCCTTT
ACAATTCACTGCAGGAAGAACAGGATTGTGAAGATGTCCAGTCCCAATCTGAACATTGTGACCTTACTGG
GCAGTTGTCTCACTTACAGTAGCGCTTACCTCTTTGGGATTCAGGATGTTTTAGTGGGGAGCTCAATGGA
AACTCTCATTCAGACAAGACTGTCCATGCTGTGCATTGGGACCTCCCTTGTGTTTGGCCCCATTCTGGGA
AAGAGCTGGCGACTCTACAAGGTGTTTACCCAAAGGGTCCCGGACAAGAGAGTGATTATCAAAGACCTGC
AGTTGCTGGGGTTGGTGGCAGCCCTGTTGATGGCTGATGTGATCCTGCTCATGACGTGGGTGCTGACTGA
TCCCATCCAGTGCCTCCAGATTCTCAGTGTCAGTATGACGGTGACAGGGAAAGACGTGTCCTGCACTTCG
ACCAGCACCCACTTCTGTGCTTCCCGGTATTCCGATGTTTGGATTGCTCTCATTTGGGGATGCAAGGGTC
TGCTCCTGCTGTATGGTGCCTACCTGGCTGGCCTGACTGGCCATGTCAGCTCCCCTCCTGTGAATCAGTC
CTTAACCATCATGGTGGGGGTCAACCTCCTTGTACTGGCTGCTGGGCTGCTTTTTGTAGTCACCAGATAC
TTGCATTCCTGGCCCAACCTGGTCTTTGGACTCACATCTGGAGGGATCTTTGTTTGTACAACTACAATCA
ACTGCTTCATCTTCATTCCCCAGCTGAAGCAATGGAAGGCATTTGAAGAGGAAAACCAAACAATCAGACG
CATGGCCAAATATTTCAGCACTCCCAACAAAAGCTTCCATACCCAGTATGGTGAGGAGGAGAACTGCCAC
CCGAGGGGAGAGAAAAGCTCCATGGAGAGGCTCCTCACAGAAAAAAATGCTGTGATTGAAAGCCTGCAGG
AACAAGTAAACAACGCCAAAGAGAAGATTGTGAGGCTGATGTCAGCTGAGTGCACCTATGACCTCCCAGA
GGGGGCTGCCCCACCTGCCTCTTCCCCGAACAAGGACGTCCAGGCGGTAGCCTCGGTCCACACCCTGGCA
GCTGCTCAGGGGCCTTCGGGTCACCTCTCTGACTTTCAGAATGATCCTGGCATGGCTGCCCGGGATTCCC
AGTGCACTTCAGGGCCCTCCTCATATGCACAAAGCCTTGAGGGGCCTGGGAAGGACTCCAGCTTCTCCCC
AGGGAAGGAGGAGAAGATATCTGACTCAAAAGACTTTTCTGATCATTTAGACTCAGGTTGTAGCCAGAAG
CCATGGACTGAGCAAAGCCTGGGTCCAGAAAGAGGAGACCAAGTCCCCATGAACCCCAGCCAGAGTCTCC
TACCAGAAAGAGGCGGCTCAGATCCCCAGAGACAGAGGCATCTGGAGAACTCAGAGGAGCCCCCAGAGCG
GCGGTCACGGGTTAGTTCAGTAATCAGGGAGAAACTTCAGGAGGTCTTACAAGATCTGGGCCTGGGCCCT
GAGGCTTCCCTCTCCACCGCCCCCTCTTGTCATCAGCAAACCTGGAAGAACAGTGCTGCCTTCAGCCCCC
AAAAGATGCCCCTCTCCAAGGAGCTCGGCTTTAGCCCTTACATGGTGAGGAGAAGGCGGGCAGCTCAGCG
GGCCCGCTCACACTTTCCTGGCTCTGCACCCTCATCTGTGGGGCATCGGGCAAACAGGACTGTTCCTGGG
GCACACAGCAGGCTACATGTGCAGAATGGGGACAGCCCCAGCCTGGCCCCACAAACTACTGATTCCAGAG
TACGAAGACCTTCTTCCAGGAAGCCTTCACTACCTTCAGATCCTCAAGACAGACCAGGTACCCTGGAGGG
CAGCAAACAAAGCCAGACAGAGCCCGAGGGGGCTAGAGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCT
GGTTCTGGCCGGGCCCCAAGTCCTGCTGCCCCATGCCTCTCCAAAGCCTCACCTGACTTGCCTGAACAGT
GGCAGCTGTGGCCCCCAGTGCCCTCAGGCTGTGCCTCCCTGTCTTCTCAACACAGCTATTTTGATACTGA
GTCCAGCAGCTCAGATGAGTTCTTCTGCCGCTGCCACCGGCCCTACTGTGAAATCTGCTTCCAGAGCTCT
TCTGACTCTAGTGACAGTGGCACATCAGACACTGACCCTGAGCCTACTGGGGGGCTGGCTTCCTGGGAAA
AGCTGTGGGCCCGCTCCAAGCCTATTGTGAACTTCAAAGATGACTTGAAACCCACGCTGGTGTGA

Translation (814 aa):
MEPEINCSELCDSFPGQELDRRPLHDLCKTTITSSHHSSKTISSLSPVLLGIVWTFLSCGLLLILFFLAF
TIHCRKNRIVKMSSPNLNIVTLLGSCLTYSSAYLFGIQDVLVGSSMETLIQTRLSMLCIGTSLVFGPILG
KSWRLYKVFTQRVPDKRVIIKDLQLLGLVAALLMADVILLMTWVLTDPIQCLQILSVSMTVTGKDVSCTS
TSTHFCASRYSDVWIALIWGCKGLLLLYGAYLAGLTGHVSSPPVNQSLTIMVGVNLLVLAAGLLFVVTRY
LHSWPNLVFGLTSGGIFVCTTTINCFIFIPQLKQWKAFEEENQTIRRMAKYFSTPNKSFHTQYGEEENCH
PRGEKSSMERLLTEKNAVIESLQEQVNNAKEKIVRLMSAECTYDLPEGAAPPASSPNKDVQAVASVHTLA
AAQGPSGHLSDFQNDPGMAARDSQCTSGPSSYAQSLEGPGKDSSFSPGKEEKISDSKDFSDHLDSGCSQK
PWTEQSLGPERGDQVPMNPSQSLLPERGGSDPQRQRHLENSEEPPERRSRVSSVIREKLQEVLQDLGLGP
EASLSTAPSCHQQTWKNSAAFSPQKMPLSKELGFSPYMVRRRRAAQRARSHFPGSAPSSVGHRANRTVPG
AHSRLHVQNGDSPSLAPQTTDSRVRRPSSRKPSLPSDPQDRPGTLEGSKQSQTEPEGARGSKAAFLRQPS
GSGRAPSPAAPCLSKASPDLPEQWQLWPPVPSGCASLSSQHSYFDTESSSSDEFFCRCHRPYCEICFQSS
SDSSDSGTSDTDPEPTGGLASWEKLWARSKPIVNFKDDLKPTLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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