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Report for CCDS63152.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63152.1 Public Homo sapiens 2 COPS7B 24 110 108 CCDS HistoryNCBI Gene:64708Re-query CCDS DB by CCDS ID:63152.1Re-query CCDS DB by GeneID:64708See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63152.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409295.5 ENSP00000386438.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409295.5Link to Ensembl Protein Viewer:ENSP00000386438.1Re-query CCDS DB by Nucleotide ID:ENST00000409295Re-query CCDS DB by Protein ID:ENSP00000386438
Original member Current member NCBI NM_001282949.3 NP_001269878.1 Accepted alive Link to Nucleotide Sequence:NM_001282949.3Link to Protein Sequence:NP_001269878.1Re-query CCDS DB by Nucleotide ID:NM_001282949Re-query CCDS DB by Protein ID:NP_001269878Link to BLAST:NP_001269878.1

Chromosomal Locations for CCDS 63152.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 231781824 231781883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231791733 231791808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231794263 231794351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231796106 231796308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231798859 231798964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231807487 231807645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (693 nt):
ATGACAGCCCGCAGAGAGTTAACTTCTGTTTACATGGAACTCAGACATCTGCAAATCATGCTTGCGGAAG
GAGCTAATGCTGCTTATTTGCAGTTGTTGAACCTGTTTGCCTATGGGACATACCCAGATTACATAGCCAA
CAAGGAGAGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTGAGCTTG
GCATCAAGAATGAAGTGTATCCCCTACTCCGTGTTGCTGAAAGACCTGGAGATGCGGAATCTCCGGGAAC
TAGAAGACCTTATCATTGAGGCTGTCTACACTGACATCATCCAGGGCAAGCTGGACCAGCGAAACCAGCT
GCTGGAAGTGGATTTCTGCATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTG
CATGAATGGTGTGATGGCTGTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAACCAGT
ACAAAGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGCAGAGGTTACCAACATCAAGAAGACACTCAA
AGCCACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCAGCTGGCTGAACGGGAGTGTCCCCCTCACGCT
GAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGTCTCCAGCCGCCACTAG

Translation (230 aa):
MTARRELTSVYMELRHLQIMLAEGANAAYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSL
ASRMKCIPYSVLLKDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTL
HEWCDGCEAVLLGIEQQVLRANQYKENHNRTQQQVEAEVTNIKKTLKATASSSAQEMEQQLAERECPPHA
EQRQPTKKMSKVKGLVSSRH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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