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Report for CCDS4718.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4718.1 Public Homo sapiens 6 DDAH2 24 110 108 CCDS HistoryNCBI Gene:23564Re-query CCDS DB by CCDS ID:4718.1Re-query CCDS DB by GeneID:23564See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4718.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375787.6 ENSP00000364943.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375787.6Link to Ensembl Protein Viewer:ENSP00000364943.2Re-query CCDS DB by Nucleotide ID:ENST00000375787Re-query CCDS DB by Protein ID:ENSP00000364943
Original member Current member EBI ENST00000375789.7 ENSP00000364945.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375789.7Link to Ensembl Protein Viewer:ENSP00000364945.2Re-query CCDS DB by Nucleotide ID:ENST00000375789Re-query CCDS DB by Protein ID:ENSP00000364945
Original member Current member EBI ENST00000375792.7 ENSP00000364949.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375792.7Link to Ensembl Protein Viewer:ENSP00000364949.3Re-query CCDS DB by Nucleotide ID:ENST00000375792Re-query CCDS DB by Protein ID:ENSP00000364949
Original member Current member EBI ENST00000436437.2 ENSP00000395759.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000436437.2Link to Ensembl Protein Viewer:ENSP00000395759.2Re-query CCDS DB by Nucleotide ID:ENST00000436437Re-query CCDS DB by Protein ID:ENSP00000395759
Original member Current member EBI ENST00000416410.6 ENSP00000397466.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000416410.6Link to Ensembl Protein Viewer:ENSP00000397466.2Re-query CCDS DB by Nucleotide ID:ENST00000416410Re-query CCDS DB by Protein ID:ENSP00000397466
Original member Current member NCBI NM_001303007.2 NP_001289936.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001303007.2Link to Protein Sequence:NP_001289936.1Re-query CCDS DB by Nucleotide ID:NM_001303007Re-query CCDS DB by Protein ID:NP_001289936Link to BLAST:NP_001289936.1
Original member Current member NCBI NM_001303008.2 NP_001289937.1 Accepted alive Link to Nucleotide Sequence:NM_001303008.2Link to Protein Sequence:NP_001289937.1Re-query CCDS DB by Nucleotide ID:NM_001303008Re-query CCDS DB by Protein ID:NP_001289937Link to BLAST:NP_001289937.1
Original member Current member NCBI NM_013974.3 NP_039268.1 Accepted alive Link to Nucleotide Sequence:NM_013974.3Link to Protein Sequence:NP_039268.1Re-query CCDS DB by Nucleotide ID:NM_013974Re-query CCDS DB by Protein ID:NP_039268Link to BLAST:NP_039268.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001289936.1 285 O95865 285 100% 0 0
NP_001289937.1 285 O95865 285 100% 0 0
NP_039268.1 285 O95865 285 100% 0 0

Chromosomal Locations for CCDS 4718.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 31727237 31727353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31727543 31727692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31728173 31728292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31728451 31728524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31728646 31728745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31728865 31729161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (858 nt):
ATGGGGACGCCGGGGGAGGGGCTGGGCCGCTGCTCCCATGCCCTGATCCGGGGAGTCCCAGAGAGCCTGG
CGTCGGGGGAAGGTGCGGGGGCTGGCCTTCCCGCTCTGGATCTGGCCAAAGCTCAAAGGGAGCACGGGGT
GCTGGGAGGTAAACTGAGGCAACGACTGGGGCTACAGCTGCTAGAACTGCCACCTGAGGAGTCATTGCCG
CTGGGACCGCTGCTTGGCGACACGGCCGTGATCCAAGGGGACACGGCCCTAATCACGCGGCCCTGGAGCC
CCGCTCGTAGGCCAGAGGTCGATGGAGTCCGCAAAGCCCTGCAAGACCTGGGGCTCCGAATTGTGGAAAT
AGGAGACGAGAACGCGACGCTGGATGGCACTGACGTTCTCTTCACCGGCCGGGAGTTTTTCGTAGGCCTC
TCCAAATGGACCAATCACCGAGGAGCTGAGATCGTGGCGGACACGTTCCGGGACTTCGCCGTCTCCACTG
TGCCAGTCTCGGGTCCCTCCCACCTGCGCGGTCTCTGCGGCATGGGGGGACCTCGCACTGTTGTGGCAGG
CAGCAGCGACGCTGCCCAAAAGGCTGTCCGGGCAATGGCAGTGCTGACAGATCACCCATATGCCTCCCTG
ACCCTCCCAGATGACGCAGCTGCTGACTGTCTCTTTCTTCGTCCTGGGTTGCCTGGTGTGCCCCCTTTCC
TCCTGCACCGTGGAGGTGGGGATCTGCCCAACAGCCAGGAGGCACTGCAGAAGCTCTCTGATGTCACCCT
GGTACCTGTGTCCTGCTCAGAACTGGAGAAGGCTGGCGCCGGGCTCAGCTCCCTCTGCTTGGTGCTCAGC
ACACGCCCCCACAGCTGA

Translation (285 aa):
MGTPGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQLLELPPEESLP
LGPLLGDTAVIQGDTALITRPWSPARRPEVDGVRKALQDLGLRIVEIGDENATLDGTDVLFTGREFFVGL
SKWTNHRGAEIVADTFRDFAVSTVPVSGPSHLRGLCGMGGPRTVVAGSSDAAQKAVRAMAVLTDHPYASL
TLPDDAAADCLFLRPGLPGVPPFLLHRGGGDLPNSQEALQKLSDVTLVPVSCSELEKAGAGLSSLCLVLS
TRPHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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