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Report for CCDS2295.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2295.1 Public Homo sapiens 2 GULP1 24 110 108 CCDS HistoryNCBI Gene:51454Re-query CCDS DB by CCDS ID:2295.1Re-query CCDS DB by GeneID:51454See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2295.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359135.7 ENSP00000352047.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359135.7Link to Ensembl Protein Viewer:ENSP00000352047.3Re-query CCDS DB by Nucleotide ID:ENST00000359135Re-query CCDS DB by Protein ID:ENSP00000352047
Original member Current member EBI ENST00000409580.5 ENSP00000386289.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409580.5Link to Ensembl Protein Viewer:ENSP00000386289.1Re-query CCDS DB by Nucleotide ID:ENST00000409580Re-query CCDS DB by Protein ID:ENSP00000386289
Original member Current member EBI ENST00000409830.6 ENSP00000386732.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409830.6Link to Ensembl Protein Viewer:ENSP00000386732.1Re-query CCDS DB by Nucleotide ID:ENST00000409830Re-query CCDS DB by Protein ID:ENSP00000386732
Original member Current member EBI ENST00000409609.5 ENSP00000386867.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409609.5Link to Ensembl Protein Viewer:ENSP00000386867.1Re-query CCDS DB by Nucleotide ID:ENST00000409609Re-query CCDS DB by Protein ID:ENSP00000386867
Original member Current member NCBI NM_001375925.1 NP_001362854.1 Accepted alive Link to Nucleotide Sequence:NM_001375925.1Link to Protein Sequence:NP_001362854.1Re-query CCDS DB by Nucleotide ID:NM_001375925Re-query CCDS DB by Protein ID:NP_001362854Link to BLAST:NP_001362854.1
Original member Current member NCBI NM_001375926.1 NP_001362855.1 Accepted alive Link to Nucleotide Sequence:NM_001375926.1Link to Protein Sequence:NP_001362855.1Re-query CCDS DB by Nucleotide ID:NM_001375926Re-query CCDS DB by Protein ID:NP_001362855Link to BLAST:NP_001362855.1
Original member Current member NCBI NM_001375927.1 NP_001362856.1 Accepted alive Link to Nucleotide Sequence:NM_001375927.1Link to Protein Sequence:NP_001362856.1Re-query CCDS DB by Nucleotide ID:NM_001375927Re-query CCDS DB by Protein ID:NP_001362856Link to BLAST:NP_001362856.1
Original member Current member NCBI NM_001375928.1 NP_001362857.1 Accepted alive Link to Nucleotide Sequence:NM_001375928.1Link to Protein Sequence:NP_001362857.1Re-query CCDS DB by Nucleotide ID:NM_001375928Re-query CCDS DB by Protein ID:NP_001362857Link to BLAST:NP_001362857.1
Original member Current member NCBI NM_001375929.1 NP_001362858.1 Accepted alive Link to Nucleotide Sequence:NM_001375929.1Link to Protein Sequence:NP_001362858.1Re-query CCDS DB by Nucleotide ID:NM_001375929Re-query CCDS DB by Protein ID:NP_001362858Link to BLAST:NP_001362858.1
Original member Current member NCBI NM_001375930.1 NP_001362859.1 Accepted alive Link to Nucleotide Sequence:NM_001375930.1Link to Protein Sequence:NP_001362859.1Re-query CCDS DB by Nucleotide ID:NM_001375930Re-query CCDS DB by Protein ID:NP_001362859Link to BLAST:NP_001362859.1
Original member Current member NCBI NM_001375931.1 NP_001362860.1 Accepted alive Link to Nucleotide Sequence:NM_001375931.1Link to Protein Sequence:NP_001362860.1Re-query CCDS DB by Nucleotide ID:NM_001375931Re-query CCDS DB by Protein ID:NP_001362860Link to BLAST:NP_001362860.1
Original member Current member NCBI NM_016315.4 NP_057399.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016315.4Link to Protein Sequence:NP_057399.1Re-query CCDS DB by Nucleotide ID:NM_016315Re-query CCDS DB by Protein ID:NP_057399Link to BLAST:NP_057399.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001362854.1 304 Q9UBP9-1 304 100% 0 0
NP_001362855.1 304 Q9UBP9-1 304 100% 0 0
NP_001362856.1 304 Q9UBP9-1 304 100% 0 0
NP_001362857.1 304 Q9UBP9-1 304 100% 0 0
NP_001362858.1 304 Q9UBP9-1 304 100% 0 0
NP_001362859.1 304 Q9UBP9-1 304 100% 0 0
NP_001362860.1 304 Q9UBP9-1 304 100% 0 0
NP_057399.1 304 Q9UBP9-1 304 100% 0 0

Chromosomal Locations for CCDS 2295.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 188477703 188477730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188483431 188483492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188522756 188522827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188529097 188529195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188541181 188541318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188569239 188569355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188570028 188570120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188584265 188584403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188587855 188587949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188593940 188594011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGAACCGTGCTTTTAGCAGGAAGAAAGACAAAACATGGATGCATACACCTGAAGCTTTATCAAAACATT
TCATTCCCTATAATGCAAAGTTTCTTGGCAGTACAGAAGTGGAACAGCCAAAAGGAACAGAAGTTGTGAG
AGATGCTGTAAGGAAACTAAAGTTTGCAAGACATATCAAGAAATCTGAAGGCCAGAAAATTCCTAAAGTG
GAGTTGCAAATATCAATTTATGGAGTAAAAATTCTAGAACCCAAAACAAAGGAAGTTCAACACAATTGCC
AGCTTCATAGAATATCTTTTTGTGCAGATGATAAAACTGACAAGAGGATATTCACTTTCATATGCAAAGA
TTCTGAGTCAAATAAACATTTGTGCTATGTATTTGACAGCGAAAAGTGTGCTGAAGAGATCACTTTAACA
ATTGGCCAAGCATTTGACCTGGCATACAGGAAATTTCTAGAATCAGGAGGAAAAGATGTTGAAACAAGAA
AACAGATCGCAGGGTTACAAAAAAGAATCCAAGACTTAGAAACAGAAAATATGGAACTTAAAAATAAAGT
ACAAGATTTGGAAAACCAACTGAGAATAACTCAAGTATCAGCACCTCCAGCAGGCAGTATGACACCTAAG
TCGCCCTCCACTGACATCTTTGATATGATTCCATTTTCTCCAATATCACACCAGTCTTCGATGCCTACTC
GCAATGGCACACAGCCACCTCCAGTACCTAGTAGATCTACTGAGATTAAACGGGACCTGTTTGGAGCAGA
ACCTTTTGACCCATTTAACTGTGGAGCAGCAGATTTCCCTCCAGATATTCAATCAAAATTAGATGAGATG
CAGGAGGGGTTCAAAATGGGACTAACTCTTGAAGGCACAGTATTTTGTCTCGACCCGTTAGACAGTAGGT
GCTGA

Translation (304 aa):
MNRAFSRKKDKTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIKKSEGQKIPKV
ELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSESNKHLCYVFDSEKCAEEITLT
IGQAFDLAYRKFLESGGKDVETRKQIAGLQKRIQDLETENMELKNKVQDLENQLRITQVSAPPAGSMTPK
SPSTDIFDMIPFSPISHQSSMPTRNGTQPPPVPSRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEM
QEGFKMGLTLEGTVFCLDPLDSRC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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