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Report for CCDS9679.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9679.1 Public Homo sapiens 14 FSCB 24 110 108 CCDS HistoryNCBI Gene:84075Re-query CCDS DB by CCDS ID:9679.1Re-query CCDS DB by GeneID:84075See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9679.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000340446.5 ENSP00000344579.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000340446.5Link to Ensembl Protein Viewer:ENSP00000344579.4Re-query CCDS DB by Nucleotide ID:ENST00000340446Re-query CCDS DB by Protein ID:ENSP00000344579
Original member Current member NCBI NM_032135.4 NP_115511.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032135.4Link to Protein Sequence:NP_115511.3Re-query CCDS DB by Nucleotide ID:NM_032135Re-query CCDS DB by Protein ID:NP_115511Link to BLAST:NP_115511.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115511.3 825 Q5H9T9 825 100% 0 0

Chromosomal Locations for CCDS 9679.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 44504510 44506987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2478 nt):
ATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAGAAAAAGAAACACATGGCCATACCAAAATCATCTA
GCCCCAAAGCTACCCATCGTATTGGTAATACTTCTGGAAGCAAAGGCAGCTACTCTGCCAAAGCCTATGA
GTCTATTAGAGTATCTTCTGAGCTTCAGCAAACTTGGACAAAGAGAAAGCATGGACAGGAAATGACTAGT
AAGTCTCTCCAGACAGACACCATTGTAGAAGAGAAAAAAGAAGTCAAGTTAGTTGAGGAAACCGTGGTAC
CTGAAGAAAAGTCAGCTGATGTTAGAGAAGCTGCTATTGAATTGCCAGAGAGTGTTCAGGATGTAGAAAT
TCCACCAAACATACCTTCAGTTCAACTAAAAATGGACAGATCTCAGCAGACCAGCCGTACAGGATACTGG
ACCATGATGAACATCCCCCCTGTAGAAAAAGTGGACAAGGAACAACAGACATACTTTAGTGAATCAGAAA
TAGTGGTTATTTCCAGGCCAGATAGTTCTTCTACAAAGTCAAAGGAAGATGCCCTGAAACATAAATCGTC
GGGAAAGATTTTTGCTAGTGAACACCCTGAATTTCAACCAGCAACAAACAGCAATGAAGAAATTGGGCAG
AAAAATATCAGCAGAACTTCATTTACTCAGGAGACTAAAAAAGGTCCCCCGGTACTTTTAGAAGATGAGC
TTAGGGAAGAAGTAACTGTACCTGTTGTACAAGAAGGTTCTGCTGTTAAAAAAGTGGCTTCTGCTGAAAT
AGAGCCTCCATCAACAGAAAAATTCCCAGCTAAAATACAGCCTCCATTAGTTGAAGAGGCCACTGCTAAA
GCGGAGCCCAGACCTGCTGAAGAGACCCATGTCCAAGTACAGCCATCAACTGAAGAGACTCCTGATGCTG
AGGCAGCCACTGCAGTTGCGGAGAATTCTGTTAAAGTTCAGCCTCCACCTGCTGAAGAGGCCCCTTTAGT
GGAGTTTCCTGCTGAAATTCAGCCTCCATCAGCTGAAGAGTCTCCTTCTGTAGAGCTTCTGGCTGAAATT
CTGCCTCCATCAGCTGAAGAGTCCCCTTCAGAAGAGCCTCCTGCTGAAATTCTGCCTCCACCAGCTGAAA
AGTCTCCTTCAGTAGAGCTTCTTGGTGAAATTCGGTCTCCCTCAGCACAAAAGGCTCCCATTGAAGTACA
GCCTTTACCAGCTGAGGGCGCCCTTGAAGAGGCCCCAGCTAAAGTAGAGCCTCCCACTGTTGAAGAGACC
CTTGCTGATGTTCAGCCTCTATTACCTGAAGAGGCTCCTAGAGAAGAGGCTCGAGAACTTCAGCTTTCAA
CAGCTATGGAGACCCCTGCAGAAGAGGCTCCTACTGAATTTCAGTCTCCATTACCTAAAGAGACCACTGC
AGAAGAGGCCTCTGCTGAAATTCAGCTTCTAGCAGCTACGGAGCCTCCTGCAGATGAAACTCCTGCCGAA
GCTCGGTCTCCACTATCTGAGGAGACTTCTGCAGAAGAGGCTCATGCTGAAGTTCAATCTCCATTAGCTG
AAGAGACCACTGCAGAAGAGGCCTCTGCTGAAATTCAGCTTCTAGCAGCTATAGAGGCTCCTGCAGATGA
AACTCCTGCTGAAGCTCAGTCTCCACTATCTGAGGAGACTTCTGCAGAAGAGGCTCCTGCTGAAGTTCAG
TCTCCATCAGCTAAGGGAGTTTCTATAGAAGAGGCCCCTCTTGAGCTTCAGCCTCCATCAGGTGAAGAGA
CCACTGCAGAAGAGGCCTCTGCTGCAATTCAGCTTCTAGCAGCTACAGAGGCTTCTGCAGAAGAGGCTCC
TGCTGAAGTTCAGCCTCCACCAGCTGAGGAGGCCCCCGCTGAAGTTCAGCCTCCACCAGCTGAGGAGGCC
CCCGCTGAAGTTCAGCCTCCACCAGCTGAGGAGGCCCCCGCTGAAGTTCAGCCTCCACCAGCTGAGGAGG
CCCCCGCTGAAGTTCAGCCTCCACCAGCTGAGGAGGCCCCCGCTGAAGTTCAGCCTCCACCAGCTGAGGA
GGCCCCTGCTGAAGTTCAGTCTCTACCAGCTGAGGAGACTCCTATAGAAGAGACCCTTGCTGCAGTACAC
TCTCCCCCAGCTGATGATGTCCCTGCAGAAGAGGCCTCCGTTGACAAACATTCCCCACCAGCTGATTTGC
TTCTGACTGAGGAGTTTCCTATAGGAGAGGCCTCTGCTGAAGTTTCACCTCCACCATCTGAACAAACCCC
TGAAGATGAGGCTCTGGTAGAGAATGTGTCTACAGAATTTCAGTCACCGCAGGTGGCAGGAATTCCAGCA
GTAAAATTAGGATCGGTTGTTTTGGAAGGTGAAGCAAAATTTGAAGAGGTTTCAAAAATCAATTCTGTCC
TTAAAGATTTGTCTAATACCAATGATGGACAGGCTCCCACTCTTGAAATAGAAAGTGTTTTTCATATAGA
ATTAAAACAACGTCCTCCTGAACTGTAG

Translation (825 aa):
MVGKSQQTDVIEKKKHMAIPKSSSPKATHRIGNTSGSKGSYSAKAYESIRVSSELQQTWTKRKHGQEMTS
KSLQTDTIVEEKKEVKLVEETVVPEEKSADVREAAIELPESVQDVEIPPNIPSVQLKMDRSQQTSRTGYW
TMMNIPPVEKVDKEQQTYFSESEIVVISRPDSSSTKSKEDALKHKSSGKIFASEHPEFQPATNSNEEIGQ
KNISRTSFTQETKKGPPVLLEDELREEVTVPVVQEGSAVKKVASAEIEPPSTEKFPAKIQPPLVEEATAK
AEPRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEI
LPPSAEESPSEEPPAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEET
LADVQPLLPEEAPREEARELQLSTAMETPAEEAPTEFQSPLPKETTAEEASAEIQLLAATEPPADETPAE
ARSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEAPADETPAEAQSPLSEETSAEEAPAEVQ
SPSAKGVSIEEAPLELQPPSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEA
PAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQSLPAEETPIEETLAAVH
SPPADDVPAEEASVDKHSPPADLLLTEEFPIGEASAEVSPPPSEQTPEDEALVENVSTEFQSPQVAGIPA
VKLGSVVLEGEAKFEEVSKINSVLKDLSNTNDGQAPTLEIESVFHIELKQRPPEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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