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Report for CCDS31436.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31436.1 Public Homo sapiens 11 KCNJ11 24 110 108 CCDS HistoryNCBI Gene:3767Re-query CCDS DB by CCDS ID:31436.1Re-query CCDS DB by GeneID:3767See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31436.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339994.5 ENSP00000345708.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000339994.5Link to Ensembl Protein Viewer:ENSP00000345708.4Re-query CCDS DB by Nucleotide ID:ENST00000339994Re-query CCDS DB by Protein ID:ENSP00000345708
Original member Current member NCBI NM_000525.4 NP_000516.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000525.4Link to Protein Sequence:NP_000516.3Re-query CCDS DB by Nucleotide ID:NM_000525Re-query CCDS DB by Protein ID:NP_000516Link to BLAST:NP_000516.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000516.3 390 Q14654-1 390 100% 0 0

Chromosomal Locations for CCDS 31436.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 17386919 17388091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1173 nt):
ATGCTGTCCCGCAAGGGCATCATCCCCGAGGAATACGTGCTGACACGCCTGGCAGAGGACCCTGCCAAGC
CCAGGTACCGTGCCCGCCAGCGGAGGGCCCGCTTTGTGTCCAAGAAAGGCAACTGCAACGTGGCCCACAA
GAACATCCGGGAGCAGGGCCGCTTCCTGCAGGACGTGTTCACCACGCTGGTGGACCTCAAGTGGCCACAC
ACATTGCTCATCTTCACCATGTCCTTCCTGTGCAGCTGGCTGCTCTTCGCCATGGCCTGGTGGCTCATCG
CCTTCGCCCACGGTGACCTGGCCCCCAGCGAGGGCACTGCTGAGCCCTGTGTCACCAGCATCCACTCCTT
CTCGTCTGCCTTCCTTTTCTCCATTGAGGTCCAAGTGACTATTGGCTTTGGGGGGCGCATGGTGACTGAG
GAGTGCCCACTGGCCATCCTGATCCTCATCGTGCAGAACATCGTGGGGCTCATGATCAACGCCATCATGC
TTGGCTGCATCTTCATGAAGACTGCCCAAGCCCACCGCAGGGCTGAGACCCTCATCTTCAGCAAGCATGC
GGTGATCGCCCTGCGCCACGGCCGCCTCTGCTTCATGCTACGTGTGGGTGACCTCCGCAAGAGCATGATC
ATCAGCGCCACCATCCACATGCAGGTGGTACGCAAGACCACCAGCCCCGAGGGCGAGGTGGTGCCCCTCC
ACCAGGTGGACATCCCCATGGAGAACGGCGTGGGTGGCAACAGCATCTTCCTGGTGGCCCCGCTGATCAT
CTACCATGTCATTGATGCCAACAGCCCACTCTACGACCTGGCACCCAGCGACCTGCACCACCACCAGGAC
CTCGAGATCATCGTCATCCTGGAAGGCGTGGTGGAAACCACGGGCATCACCACCCAGGCCCGCACCTCCT
ACCTGGCCGATGAGATCCTGTGGGGCCAGCGCTTTGTGCCCATTGTAGCTGAGGAGGACGGACGTTACTC
TGTGGACTACTCCAAGTTTGGCAACACCGTCAAAGTGCCCACACCACTCTGCACGGCCCGCCAGCTTGAT
GAGGACCACAGCCTACTGGAAGCTCTGACCCTCGCCTCAGCCCGCGGGCCCCTGCGCAAGCGCAGCGTGC
CCATGGCCAAGGCCAAGCCCAAGTTCAGCATCTCTCCAGATTCCCTGTCCTGA

Translation (390 aa):
MLSRKGIIPEEYVLTRLAEDPAKPRYRARQRRARFVSKKGNCNVAHKNIREQGRFLQDVFTTLVDLKWPH
TLLIFTMSFLCSWLLFAMAWWLIAFAHGDLAPSEGTAEPCVTSIHSFSSAFLFSIEVQVTIGFGGRMVTE
ECPLAILILIVQNIVGLMINAIMLGCIFMKTAQAHRRAETLIFSKHAVIALRHGRLCFMLRVGDLRKSMI
ISATIHMQVVRKTTSPEGEVVPLHQVDIPMENGVGGNSIFLVAPLIIYHVIDANSPLYDLAPSDLHHHQD
LEIIVILEGVVETTGITTQARTSYLADEILWGQRFVPIVAEEDGRYSVDYSKFGNTVKVPTPLCTARQLD
EDHSLLEALTLASARGPLRKRSVPMAKAKPKFSISPDSLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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