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Report for CCDS8509.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8509.1 Public Homo sapiens 12 FBXL14 24 110 108 CCDS HistoryNCBI Gene:144699Re-query CCDS DB by CCDS ID:8509.1Re-query CCDS DB by GeneID:144699See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8509.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339235.4 ENSP00000344855.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000339235.4Link to Ensembl Protein Viewer:ENSP00000344855.3Re-query CCDS DB by Nucleotide ID:ENST00000339235Re-query CCDS DB by Protein ID:ENSP00000344855
Original member Current member NCBI NM_152441.3 NP_689654.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152441.3Link to Protein Sequence:NP_689654.1Re-query CCDS DB by Nucleotide ID:NM_152441Re-query CCDS DB by Protein ID:NP_689654Link to BLAST:NP_689654.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689654.1 418 Q8N1E6 418 100% 0 0

Chromosomal Locations for CCDS 8509.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 1566748 1566810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 1592873 1594066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1257 nt):
ATGGAGACCCACATCTCATGCCTGTTCCCGGAGCTGCTGGCCATGATCTTCGGCTACCTGGACGTCCGGG
ACAAGGGGCGCGCGGCGCAGGTGTGCACCGCCTGGCGGGACGCCGCCTACCACAAGTCGGTGTGGCGGGG
GGTGGAGGCCAAGCTGCACCTGCGCCGGGCCAACCCGTCGCTGTTCCCCAGCCTGCAGGCCCGGGGCATC
CGCCGGGTGCAGATCCTGAGCCTCCGCCGCAGCCTCAGCTACGTGATCCAGGGCATGGCCAACATCGAGA
GCCTCAACCTCAGCGGCTGCTACAACCTCACCGACAACGGGCTGGGCCACGCGTTTGTGCAGGAGATCGG
CTCCCTGCGCGCTCTCAACCTGAGCCTCTGCAAGCAGATCACTGACAGCAGCCTGGGCCGCATAGCCCAG
TACCTCAAGGGCCTGGAGGTGCTGGAGCTGGGAGGTTGCAGCAACATCACCAACACTGGCCTTCTGCTCA
TCGCCTGGGGTCTGCAGCGCCTCAAGAGCCTTAACCTCCGCAGCTGCCGCCACCTTTCGGATGTGGGCAT
CGGGCACCTGGCCGGCATGACGCGCAGCGCGGCGGAGGGCTGCCTGGGCCTGGAGCAGCTCACGCTACAG
GACTGCCAGAAGCTCACAGATCTTTCTCTAAAGCACATCTCCCGAGGGCTGACGGGCCTGAGGCTCCTCA
ACCTCAGCTTCTGTGGGGGAATCTCGGACGCTGGCCTCCTGCACCTGTCGCACATGGGCAGCCTGCGCAG
CCTCAACCTGCGCTCCTGTGACAACATCAGTGACACGGGCATCATGCATCTGGCCATGGGCAGCCTGCGC
CTCTCGGGGCTGGATGTTTCGTTCTGTGACAAGGTGGGAGACCAGAGTCTGGCTTACATAGCCCAGGGGC
TGGATGGCCTCAAGTCTCTCTCCCTCTGCTCCTGCCACATCAGTGATGATGGCATCAACCGCATGGTGCG
GCAGATGCACGGGCTGCGCACGCTCAACATTGGACAGTGTGTGCGCATCACGGACAAGGGCCTGGAGCTG
ATCGCTGAGCACCTGAGCCAACTCACCGGCATAGACCTGTACGGCTGCACCCGAATCACCAAGCGCGGCC
TGGAGCGCATCACGCAGCTGCCGTGCCTCAAGGTACTCAACCTGGGACTCTGGCAGATGACGGACAGTGA
GAAGGAGGCACGAGGGGATTTTTCTCCATTATTCACTGTGAGAACTCGGGGAAGCTCCAGAAGGTGA

Translation (418 aa):
METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPSLFPSLQARGI
RRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQ
YLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQ
DCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLR
LSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLEL
IAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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