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Report for CCDS235.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
235.1 Public Homo sapiens 1 ASAP3 24 110 108 CCDS HistoryNCBI Gene:55616Re-query CCDS DB by CCDS ID:235.1Re-query CCDS DB by GeneID:55616See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 235.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336689.8 ENSP00000338769.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000336689.8Link to Ensembl Protein Viewer:ENSP00000338769.3Re-query CCDS DB by Nucleotide ID:ENST00000336689Re-query CCDS DB by Protein ID:ENSP00000338769
Original member Current member NCBI NM_017707.4 NP_060177.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017707.4Link to Protein Sequence:NP_060177.2Re-query CCDS DB by Nucleotide ID:NM_017707Re-query CCDS DB by Protein ID:NP_060177Link to BLAST:NP_060177.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060177.2 903 Q8TDY4-1 903 100% 0 0

Chromosomal Locations for CCDS 235.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 23429856 23429930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23431035 23431125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23431696 23431918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23433077 23433272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23433425 23433532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23433626 23433693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23434254 23434369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23434533 23434618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23435851 23436028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23436560 23436654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23436911 23437044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23437130 23437320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23437424 23437472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23438747 23438834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23439161 23439230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23441102 23441211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23441387 23441473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23441655 23441730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23442186 23442271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23442501 23442612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23451479 23451528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23452697 23452771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23455881 23456026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23456122 23456194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23484005 23484133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2712 nt):
ATGCCGGAGCAGTTCAGCGTCGCCGAGTTCCTGGCCGTCACCGCGGAGGACCTCAGCTCCCCGGCTGGGG
CCGCCGCCTTCGCCGCCAAGATGCCCCGGTACCGAGGGGCGGCGCTGGCGCGGGAGGAGATCTTGGAAGG
AGACCAAGCCATCCTGCAGAGAATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGGCCATGTG
GAGAATGAAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATG
AGCTGTCCACAGGCTTCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTGCGCTCTTCAAGAACCTGAT
TCAGAACTTGAACAACATTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCGA
CAGGATTCCAAAAAACAGCTGGAGAAGGCATGGAAGGACTATGAAGCCAAAATGGCCAAGCTGGAGAAGG
AGCGCGATCGGGCCAGGGTGACAGGAGGGATCCCTGGGGAGGTGGCCCAGGACATGCAGAGAGAGCGGCG
CATCTTCCAGCTGCACATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCCAGATGAAGCAAGGTCCTGAC
TTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGCTGCCC
AGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA
GCTACAGAAGCTGACCCAGCTCCGGGACTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGAGGAACAC
CTGAGCCGGAAGAACTCAGGATGTGGCTATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGG
AGAAAGTGGGCTTTCTATACAAGAAAAGTGACGGAATTCGAAGAGTCTGGCAGAAAAGGAAGTGTGGAGT
CAAGTATGGCTGCCTGACCATCTCACACAGCACGATAAACCGGCCCCCGGTGAAGCTGACCCTGCTGACG
TGCCAAGTGAGGCCAAACCCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACT
TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCT
GAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGGCCCGGGGTCCTGGGGGTCCGCCGGCCATGATGGGGAG
CCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACT
GCGGGGCTGCAGACCCCACGTGGCTCAGCACCAACCTGGGCGTGCTCACCTGCATCCAGTGCTCGGGCGT
CCACCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGGGCCCCTCCGAG
TTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGTCATGGAGGCCCAGCTACCCTCACACG
GCGGCCCTAAACCCTCAGCTGAGAGTGACATGGGCACCCGCAGGGACTACATTATGGCCAAGTATGTGGA
GCATAGGTTTGCACGCCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGCCATTTGCAACAGGGACCTC
CTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAGG
CACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTT
CATCATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTGCACTACGCAGCA
CTCTACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGCACAGTAAATGAAG
CAGGCGAGACAGCTCTGGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGAGGAGCTGCTGGAGCAGGC
CCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCT
GACAGTGAGGAGGATGAGGAAGAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTG
GGAGGCTGGACATCAGCAACAAGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGCGA
GAGTGAGGACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGA
CATGCCAGTGGAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACCCCTGAGAGCCTGG
GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCTTGGAACCTGGGGATCCCAGCCAAGCCCCACCCAA
CTCTGAAGAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACATCCGGGACCACCCCTTCG
GAGATGTACCTCCCCGTCAGATTCAGCTCCGAGAGCACTCGCTCCTATCGGCGGGGGGCGCGGAGCCCTG
AAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGG
CTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAG

Translation (903 aa):
MPEQFSVAEFLAVTAEDLSSPAGAAAFAAKMPRYRGAALAREEILEGDQAILQRIKKAVRAIHSSGLGHV
ENEEQYREAVESLGNSHLSQNSHELSTGFLNLAVFTREVAALFKNLIQNLNNIVSFPLDSLMKGQLRDGR
QDSKKQLEKAWKDYEAKMAKLEKERDRARVTGGIPGEVAQDMQRERRIFQLHMCEYLLKAGESQMKQGPD
FLQSLIKFFHAQHNFFQDGWKAAQSLFPFIEKLAASVHALHQAQEDELQKLTQLRDSLRGTLQLESREEH
LSRKNSGCGYSIHQHQGNKQFGTEKVGFLYKKSDGIRRVWQKRKCGVKYGCLTISHSTINRPPVKLTLLT
CQVRPNPEEKKCFDLVTHNRTYHFQAEDEHECEAWVSVLQNSKDEALSSAFLGEPSAGPGSWGSAGHDGE
PHDLTKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGPSE
LLLALNMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPEPQRLWTAICNRDL
LSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAA
LYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSWVISTEPGS
DSEEDEEEKRCLLKLPAQAHWASGRLDISNKTYETVASLGAATPQGESEDCPPPLPVKNSSRTLVQGCAR
HASGDRSEVSSLSSEAPETPESLGSPASSSSLMSPLEPGDPSQAPPNSEEGLREPPGTSRPSLTSGTTPS
EMYLPVRFSSESTRSYRRGARSPEDGPSARQPLPRRNVPVGITEGDGSRTGSLPASSVQLLQD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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