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Report for CCDS31762.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31762.1 Public Homo sapiens 12 REP15 24 110 108 CCDS HistoryNCBI Gene:387849Re-query CCDS DB by CCDS ID:31762.1Re-query CCDS DB by GeneID:387849See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31762.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310791.4 ENSP00000310335.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310791.4Link to Ensembl Protein Viewer:ENSP00000310335.2Re-query CCDS DB by Nucleotide ID:ENST00000310791Re-query CCDS DB by Protein ID:ENSP00000310335
Original member Current member NCBI NM_001029874.3 NP_001025045.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001029874.3Link to Protein Sequence:NP_001025045.3Re-query CCDS DB by Nucleotide ID:NM_001029874Re-query CCDS DB by Protein ID:NP_001025045Link to BLAST:NP_001025045.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025045.3 236 Q6BDI9 236 100% 0 0

Chromosomal Locations for CCDS 31762.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 27696563 27697273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (711 nt):
ATGGGGCAGAAAGCATCGCAACAGTTGGCTCTGAAGGACAGCAAAGAGGTGCCCGTCGTCTGTGAGGTGG
TCAGTGAAGCTATAGTCCATGCAGCTCAGAAACTGAAGGAGTACCTTGGATTTGAATATCCTCCAAGTAA
ACTCTGCCCAGCTGCAAATACTCTGAATGAGATCTTCTTAATCCATTTCATCACTTTCTGCCAAGAAAAG
GGAGTTGATGAGTGGCTGACCACCACCAAGATGACCAAGCACCAAGCCTTCCTGTTTGGTGCAGACTGGA
TTTGGACCTTTTGGGGATCCAACAAGCAAATAAAGCTTCAGCTCGCAGTACAGACTCTGCAGATGTCTTC
ACCTCCTCCTGTGGAATCTAAGCCTTGTGACCTTTCCAATCCAGAATCAAGGGTAGAGGAGTCTTCCTGG
AAGAAAAGTAGATTTGATAAGCTGGAAGAATTCTGTAACTTAATAGGAGAGGATTGCCTGGGTCTGTTTA
TCATCTTTGGTATGCCAGGAAAGCCTAAAGACATCAGGGGAGTTGTCCTGGACAGTGTCAAAAGTCAGAT
GGTGAGGAGCCATCTGCCAGGAGGGAAGGCTGTGGCTCAGTTTGTCCTGGAAACTGAAGATTGTGTGTTC
ATCAAAGAGCTGCTCAGAAATTGTCTGAGTAAGAAAGACGGGCTGAGAGAGGTGGGCAAGGTTTATATCA
GCATTCTCTGA

Translation (236 aa):
MGQKASQQLALKDSKEVPVVCEVVSEAIVHAAQKLKEYLGFEYPPSKLCPAANTLNEIFLIHFITFCQEK
GVDEWLTTTKMTKHQAFLFGADWIWTFWGSNKQIKLQLAVQTLQMSSPPPVESKPCDLSNPESRVEESSW
KKSRFDKLEEFCNLIGEDCLGLFIIFGMPGKPKDIRGVVLDSVKSQMVRSHLPGGKAVAQFVLETEDCVF
IKELLRNCLSKKDGLREVGKVYISIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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