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Report for CCDS31412.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31412.1 Public Homo sapiens 11 MRPL17 24 110 108 CCDS HistoryNCBI Gene:63875Re-query CCDS DB by CCDS ID:31412.1Re-query CCDS DB by GeneID:63875See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31412.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000288937.7 ENSP00000288937.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000288937.7Link to Ensembl Protein Viewer:ENSP00000288937.6Re-query CCDS DB by Nucleotide ID:ENST00000288937Re-query CCDS DB by Protein ID:ENSP00000288937
Original member Current member NCBI NM_022061.4 NP_071344.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022061.4Link to Protein Sequence:NP_071344.1Re-query CCDS DB by Nucleotide ID:NM_022061Re-query CCDS DB by Protein ID:NP_071344Link to BLAST:NP_071344.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071344.1 175 Q9NRX2 175 100% 0 0

Chromosomal Locations for CCDS 31412.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 6682118 6682402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6682747 6682815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6683123 6683296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (528 nt):
ATGCGGCTGTCGGTCGCTGCAGCGATCTCCCATGGCCGCGTATTTCGCCGTATGGGCCTCGGTCCCGAGT
CCCGCATCCATCTGTTGCGGAACTTGCTCACAGGGCTGGTGCGGCACGAACGCATCGAGGCACCATGGGC
GCGTGTGGACGAAATGAGGGGCTACGCGGAGAAGCTCATCGACTATGGGAAGCTGGGAGACACTAACGAA
CGAGCCATGCGCATGGCTGACTTCTGGCTCACAGAGAAGGATTTGATCCCAAAGCTGTTTCAAGTACTGG
CCCCTCGGTACAAAGATCAAACTGGGGGCTACACAAGAATGCTGCAGATCCCAAATCGGAGTTTGGATCG
GGCCAAGATGGCAGTGATCGAGTATAAAGGGAATTGCCTCCCACCCCTGCCTCTGCCTCGCAGAGACAGC
CACCTTACACTCCTAAACCAGCTGCTGCAGGGTTTGCGGCAGGACCTCAGGCAAAGCCAGGAAGCAAGCA
ACCACAGCTCCCACACAGCTCAAACACCAGGGATTTAA

Translation (175 aa):
MRLSVAAAISHGRVFRRMGLGPESRIHLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLIDYGKLGDTNE
RAMRMADFWLTEKDLIPKLFQVLAPRYKDQTGGYTRMLQIPNRSLDRAKMAVIEYKGNCLPPLPLPRRDS
HLTLLNQLLQGLRQDLRQSQEASNHSSHTAQTPGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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