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Report for CCDS2174.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2174.1 Public Homo sapiens 2 CCNT2 24 110 108 CCDS HistoryNCBI Gene:905Re-query CCDS DB by CCDS ID:2174.1Re-query CCDS DB by GeneID:905See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2174.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264157.10 ENSP00000264157.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264157.10Link to Ensembl Protein Viewer:ENSP00000264157.5Re-query CCDS DB by Nucleotide ID:ENST00000264157Re-query CCDS DB by Protein ID:ENSP00000264157
Original member Current member NCBI NM_058241.3 NP_490595.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_058241.3Link to Protein Sequence:NP_490595.1Re-query CCDS DB by Nucleotide ID:NM_058241Re-query CCDS DB by Protein ID:NP_490595Link to BLAST:NP_490595.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_490595.1 730 O60583-1 730 100% 0 0

Chromosomal Locations for CCDS 2174.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 134918855 134919012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134919810 134919891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134936841 134936969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134939002 134939062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134942612 134942674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134946101 134946146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134947736 134947899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134952641 134952711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 134953230 134954648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2193 nt):
ATGGCGTCGGGCCGTGGAGCTTCTTCTCGCTGGTTCTTTACTCGGGAACAGCTGGAGAACACGCCGAGCC
GCCGCTGCGGAGTGGAGGCGGATAAAGAGCTCTCGTGCCGCCAGCAGGCGGCCAACCTCATCCAGGAGAT
GGGACAGCGTCTCAATGTCTCTCAGCTTACAATAAACACTGCGATTGTTTATATGCACAGGTTTTATATG
CACCATTCTTTCACCAAATTCAACAAAAATATAATATCGTCTACTGCATTATTTTTGGCTGCAAAAGTGG
AAGAACAGGCTCGAAAACTTGAACATGTTATCAAAGTAGCACATGCTTGTCTTCATCCTCTAGAGCCACT
GCTGGATACTAAATGTGATGCTTACCTTCAACAGACTCAAGAACTGGTTATACTTGAAACCATAATGCTA
CAAACTCTAGGTTTTGAGATCACCATTGAACACCCACACACAGATGTGGTGAAATGTACCCAGTTAGTAA
GAGCAAGCAAGGATTTGGCACAGACATCCTATTTCATGGCTACCAACAGTCTGCATCTTACAACCTTCTG
TCTTCAGTACAAACCAACAGTGATAGCATGTGTATGCATTCATTTGGCTTGCAAATGGTCCAATTGGGAG
ATCCCTGTATCAACTGATGGAAAGCATTGGTGGGAATATGTGGATCCTACAGTTACTCTAGAATTATTAG
ATGAGCTAACACATGAGTTTCTACAAATATTGGAGAAAACGCCTAATAGGTTGAAGAAGATTCGAAACTG
GAGGGCTAATCAGGCAGCTAGGAAACCAAAAGTAGATGGACAGGTATCAGAGACACCACTTCTTGGTTCA
TCTTTGGTCCAGAATTCCATTTTAGTAGATAGTGTCACTGGTGTGCCTACAAACCCAAGTTTTCAGAAAC
CATCTACATCAGCATTCCCTGCGCCAGTACCTCTAAATTCAGGAAATATTTCTGTTCAAGACAGCCATAC
ATCTGATAATTTGTCAATGCTAGCAACAGGAATGCCAAGTACTTCATACGGTTTATCATCACACCAGGAA
TGGCCTCAACATCAAGACTCAGCAAGGACAGAACAGCTATATTCACAGAAACAGGAGACATCTTTGTCTG
GTAGCCAGTACAACATCAACTTCCAGCAGGGACCTTCTATATCACTGCATTCAGGATTACATCACAGACC
TGACAAAATTTCAGATCATTCTTCTGTTAAGCAAGAATATACTCATAAAGCAGGGAGCAGTAAACACCAT
GGGCCAATTTCCACTACTCCAGGAATAATTCCTCAGAAAATGTCTTTAGATAAATATAGAGAAAAGCGTA
AACTAGAAACTCTTGATCTCGATGTAAGGGATCATTATATAGCTGCCCAGGTAGAACAGCAGCACAAACA
AGGGCAGTCACAGGCAGCCAGCAGCAGTTCTGTTACTTCTCCCATTAAAATGAAAATACCTATCGCAAAT
ACTGAAAAATACATGGCAGACAAAAAGGAAAAGAGTGGGTCACTGAAATTACGGATTCCAATACCACCCA
CTGATAAAAGCGCCAGTAAAGAAGAACTGAAAATGAAAATAAAAGTTTCTTCTTCAGAAAGACACAGCTC
TTCTGATGAAGGCAGTGGGAAGAGCAAACATTCAAGCCCACATATTAGCAGAGACCATAAGGAGAAGCAC
AAGGAGCATCCTTCAAGCCGCCACCACACCAGCAGCCACAAGCATTCCCACTCGCATAGTGGCAGCAGCA
GCGGTGGCAGTAAACACAGTGCCGACGGAATACCACCCACTGTTCTGAGGAGTCCTGTTGGCCTGAGCAG
TGATGGCATTTCCTCTAGCTCCAGCTCTTCAAGGAAGAGGCTGCATGTCAATGATGCATCTCACAACCAC
CACTCCAAAATGAGCAAAAGTTCCAAAAGTTCAGGTAGTTCATCTAGTTCTTCCTCCTCTGTTAAGCAGT
ATATATCCTCTCACAACTCTGTTTTTAACCATCCCTTACCCCCTCCTCCCCCTGTCACATACCAGGTGGG
CTACGGACATCTCAGCACCCTCGTGAAACTGGACAAGAAGCCAGTGGAGACCAACGGTCCTGATGCCAAT
CACGAGTACAGTACAAGCAGCCAGCATATGGACTACAAAGACACATTCGACATGCTGGACTCACTGTTAA
GTGCCCAAGGAATGAACATGTAA

Translation (730 aa):
MASGRGASSRWFFTREQLENTPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHRFYM
HHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTQELVILETIML
QTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWE
IPVSTDGKHWWEYVDPTVTLELLDELTHEFLQILEKTPNRLKKIRNWRANQAARKPKVDGQVSETPLLGS
SLVQNSILVDSVTGVPTNPSFQKPSTSAFPAPVPLNSGNISVQDSHTSDNLSMLATGMPSTSYGLSSHQE
WPQHQDSARTEQLYSQKQETSLSGSQYNINFQQGPSISLHSGLHHRPDKISDHSSVKQEYTHKAGSSKHH
GPISTTPGIIPQKMSLDKYREKRKLETLDLDVRDHYIAAQVEQQHKQGQSQAASSSSVTSPIKMKIPIAN
TEKYMADKKEKSGSLKLRIPIPPTDKSASKEELKMKIKVSSSERHSSSDEGSGKSKHSSPHISRDHKEKH
KEHPSSRHHTSSHKHSHSHSGSSSGGSKHSADGIPPTVLRSPVGLSSDGISSSSSSSRKRLHVNDASHNH
HSKMSKSSKSSGSSSSSSSSVKQYISSHNSVFNHPLPPPPPVTYQVGYGHLSTLVKLDKKPVETNGPDAN
HEYSTSSQHMDYKDTFDMLDSLLSAQGMNM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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