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Report for CCDS32969.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32969.2 Public Homo sapiens 19 MAU2 24 110 108 CCDS HistoryNCBI Gene:23383Re-query CCDS DB by CCDS ID:32969.2Re-query CCDS DB by GeneID:23383See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 32969.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262815.13 ENSP00000262815.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262815.13Link to Ensembl Protein Viewer:ENSP00000262815.9Re-query CCDS DB by Nucleotide ID:ENST00000262815Re-query CCDS DB by Protein ID:ENSP00000262815
Original member Current member NCBI NM_015329.4 NP_056144.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015329.4Link to Protein Sequence:NP_056144.3Re-query CCDS DB by Nucleotide ID:NM_015329Re-query CCDS DB by Protein ID:NP_056144Link to BLAST:NP_056144.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056144.3 613 Q9Y6X3-1 613 100% 0 0

Chromosomal Locations for CCDS 32969.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 19320860 19321135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19335718 19335735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19336122 19336187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19337170 19337265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19338845 19338939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19340846 19340873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19341252 19341407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19342535 19342681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19342776 19342866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19343837 19343940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19344849 19344926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19345304 19345369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19347280 19347366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19348889 19348938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19349155 19349232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19349325 19349436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19354355 19354445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19355264 19355391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19355708 19355782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1842 nt):
ATGGCGGCTCAGGCGGCGGCAGCGGCCCAGGCGGCGGCGGCCCAGGCTGCGCAGGCCGAGGCGGCCGACT
CGTGGTACCTGGCGCTTCTGGGCTTCGCTGAGCACTTCCGCACTTCCAGCCCGCCCAAAATCCGCCTGTG
CGTGCACTGCCTGCAGGCCGTGTTCCCCTTCAAGCCGCCGCAGCGCATCGAGGCCCGTACACACCTGCAG
CTGGGCTCCGTTCTCTATCACCACACCAAGAACAGCGAGCAGGCGCGCAGCCACCTGGAGAAGGCGTGGT
TGATATCACAGCAAATCCCGCAGTTCGAAGATGTTAAATTTGAAGCAGCAAGTCTGTTGTCTGAATTGTA
CTGTCAAGAGAATTCCGTTGATGCAGCAAAGCCGCTGCTGCGGAAGGCGATCCAGATCTCACAGCAGACC
CCATATTGGCACTGCCGCCTGCTCTTCCAGCTCGCTCAACTGCACACGCTTGAGAAGGACCTGGTGTCGG
CCTGTGACCTCCTGGGTGTAGGGGCCGAGTACGCCCGGGTGGTGGGATCTGAATACACACGGGCGCTGTT
CCTCCTCAGCAAGGGGATGCTGCTGCTGATGGAGCGAAAGCTGCAGGAGGTGCACCCGCTGCTGACCCTC
TGCGGGCAGATCGTGGAGAACTGGCAGGGGAACCCCATCCAGAAGGAGTCGCTGCGTGTCTTCTTCCTGG
TGCTCCAGGTCACCCACTATCTGGATGCCGGGCAGGTGAAGAGCGTGAAGCCGTGTCTGAAGCAGCTGCA
GCAGTGCATCCAGACCATCTCCACACTGCACGATGATGAGATCCTGCCCAGCAACCCCGCTGACCTCTTC
CACTGGCTGCCCAAGGAGCACATGTGTGTGCTTGTCTACCTGGTGACTGTGATGCACTCCATGCAGGCCG
GCTACCTGGAGAAGGCGCAGAAGTACACGGACAAGGCCCTCATGCAGCTGGAGAAGCTCAAGATGCTGGA
CTGCAGCCCCATCCTGTCATCCTTCCAAGTGATCCTGCTGGAGCACATCATCATGTGCCGCCTTGTCACG
GGTCACAAGGCCACGGCGCTGCAGGAGATCTCCCAGGTCTGCCAGCTGTGCCAGCAGTCCCCCCGGCTCT
TCTCCAACCATGCAGCACAGCTGCACACATTGCTGGGCCTGTACTGTGTCTCTGTCAACTGCATGGACAA
CGCGGAAGCCCAGTTCACCACGGCCCTGCGGCTCACCAACCACCAGGAGCTGTGGGCCTTCATCGTCACC
AACCTGGCGAGTGTGTATATACGGGAAGGAAATAGACACCAAGAGGTACTCTACAGTCTGCTGGAGAGGA
TCAACCCGGACCACAGCTTCCCTGTCAGCTCGCACTGCCTCCGAGCAGCCGCCTTCTATGTGCGTGGGCT
CTTCTCCTTCTTCCAGGGACGCTACAACGAGGCCAAGCGATTTCTGCGGGAAACTCTGAAGATGTCCAAT
GCTGAGGACCTGAACCGGCTCACAGCCTGCTCCCTCGTGCTTCTGGGCCACATCTTCTATGTGCTGGGAA
ACCACAGGGAGAGTAACAACATGGTGGTGCCTGCCATGCAGCTCGCCAGCAAGATCCCGGACATGTCGGT
ACAGCTGTGGTCGTCAGCACTGCTGAGAGACCTGAATAAAGCCTGTGGGAACGCCATGGATGCCCATGAA
GCCGCCCAGATGCACCAGAACTTCTCGCAGCAGCTGCTCCAGGACCACATTGAGGCCTGCAGCCTCCCCG
AACACAACCTCATCACGTGGACAGACGGTCCACCCCCCGTGCAGTTCCAAGCTCAGAATGGACCCAACAC
CAGCCTGGCCAGCCTCCTGTGA

Translation (613 aa):
MAAQAAAAAQAAAAQAAQAEAADSWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPPQRIEARTHLQ
LGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDAAKPLLRKAIQISQQT
PYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTL
CGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLF
HWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVT
GHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVT
NLASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKRFLRETLKMSN
AEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHE
AAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPVQFQAQNGPNTSLASLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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