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Report for CCDS1924.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1924.1 Public Homo sapiens 2 PRADC1 24 110 108 CCDS HistoryNCBI Gene:84279Re-query CCDS DB by CCDS ID:1924.1Re-query CCDS DB by GeneID:84279See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1924.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258083.3 ENSP00000258083.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258083.3Link to Ensembl Protein Viewer:ENSP00000258083.2Re-query CCDS DB by Nucleotide ID:ENST00000258083Re-query CCDS DB by Protein ID:ENSP00000258083
Original member Current member NCBI NM_032319.3 NP_115695.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032319.3Link to Protein Sequence:NP_115695.1Re-query CCDS DB by Nucleotide ID:NM_032319Re-query CCDS DB by Protein ID:NP_115695Link to BLAST:NP_115695.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115695.1 188 Q9BSG0 188 100% 0 0

Chromosomal Locations for CCDS 1924.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 73228454 73228574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73228795 73228962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73229461 73229570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73230113 73230213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73233094 73233160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (567 nt):
ATGGTCCCCGGCGCCGCGGGCTGGTGTTGTCTCGTGCTCTGGCTCCCCGCGTGCGTCGCGGCCCACGGCT
TCCGTATCCATGATTATTTGTACTTTCAAGTGCTGAGTCCTGGGGACATTCGATACATCTTCACAGCCAC
ACCTGCCAAGGACTTTGGTGGTATCTTTCACACAAGGTATGAGCAGATTCACCTTGTCCCCGCTGAACCT
CCAGAGGCCTGCGGGGAACTCAGCAACGGTTTCTTCATCCAGGACCAGATTGCTCTGGTGGAGAGGGGGG
GCTGCTCCTTCCTCTCCAAGACTCGGGTGGTCCAGGAGCACGGCGGGCGGGCGGTGATCATCTCTGACAA
CGCAGTTGACAATGACAGCTTCTACGTGGAGATGATCCAGGACAGTACCCAGCGCACAGCTGACATCCCC
GCCCTCTTCCTGCTCGGCCGAGACGGCTACATGATCCGCCGCTCTCTGGAACAGCATGGGCTGCCATGGG
CCATCATTTCCATCCCAGTCAATGTCACCAGCATCCCCACCTTTGAGCTGCTGCAACCGCCCTGGACCTT
CTGGTAG

Translation (188 aa):
MVPGAAGWCCLVLWLPACVAAHGFRIHDYLYFQVLSPGDIRYIFTATPAKDFGGIFHTRYEQIHLVPAEP
PEACGELSNGFFIQDQIALVERGGCSFLSKTRVVQEHGGRAVIISDNAVDNDSFYVEMIQDSTQRTADIP
ALFLLGRDGYMIRRSLEQHGLPWAIISIPVNVTSIPTFELLQPPWTFW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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