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Report for CCDS12610.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12610.1 Public Homo sapiens 19 CEACAM8 24 110 108 CCDS HistoryNCBI Gene:1088Re-query CCDS DB by CCDS ID:12610.1Re-query CCDS DB by GeneID:1088See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12610.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000244336.10 ENSP00000244336.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000244336.10Link to Ensembl Protein Viewer:ENSP00000244336.5Re-query CCDS DB by Nucleotide ID:ENST00000244336Re-query CCDS DB by Protein ID:ENSP00000244336
Original member Current member NCBI NM_001816.4 NP_001807.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001816.4Link to Protein Sequence:NP_001807.2Re-query CCDS DB by Nucleotide ID:NM_001816Re-query CCDS DB by Protein ID:NP_001807Link to BLAST:NP_001807.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001807.2 349 P31997 349 100% 0 0

Chromosomal Locations for CCDS 12610.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 42583246 42583337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42588784 42589038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42589457 42589735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42593541 42593900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42594765 42594828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1050 nt):
ATGGGGCCCATCTCAGCCCCTTCCTGCAGATGGCGCATCCCCTGGCAGGGGCTCCTGCTCACAGCCTCAC
TTTTCACCTTCTGGAACCCGCCCACCACTGCTCAGCTCACTATTGAAGCTGTGCCATCCAATGCTGCAGA
GGGGAAGGAGGTTCTTCTACTTGTCCACAATCTGCCCCAGGACCCTCGTGGCTACAACTGGTACAAAGGG
GAAACAGTGGATGCCAACCGTCGAATTATAGGATATGTAATATCAAATCAACAGATTACCCCAGGGCCTG
CATACAGCAATCGAGAGACAATATACCCCAATGCATCCCTGCTGATGCGGAACGTCACCAGAAATGACAC
AGGATCCTACACCCTACAAGTCATAAAGCTAAATCTTATGAGTGAAGAAGTAACTGGCCAGTTCAGCGTA
CATCCGGAGACTCCCAAGCCCTCCATCTCCAGCAACAACTCCAACCCCGTGGAGGACAAGGATGCTGTGG
CCTTCACCTGTGAACCTGAGACTCAGAACACAACCTACCTGTGGTGGGTAAATGGTCAGAGTCTCCCGGT
CAGTCCCAGGCTGCAGCTGTCCAATGGCAACAGGACCCTCACTCTACTCAGTGTCACAAGGAATGACGTA
GGACCCTATGAATGTGAAATACAGAACCCAGCGAGTGCAAACTTCAGTGACCCAGTCACCCTGAATGTCC
TCTATGGCCCAGATGCCCCCACCATTTCCCCTTCAGACACCTATTACCATGCAGGGGTAAATCTCAACCT
CTCCTGCCATGCGGCCTCTAATCCACCCTCACAGTATTCTTGGTCTGTCAATGGCACATTCCAGCAATAC
ACACAAAAGCTCTTTATCCCCAACATCACTACAAAGAACAGCGGATCCTATGCCTGCCACACCACTAACT
CAGCCACTGGCCGCAACAGGACCACAGTCAGGATGATCACAGTCTCTGATGCTTTAGTACAAGGAAGTTC
TCCTGGCCTCTCAGCTAGAGCCACTGTCAGCATCATGATTGGAGTACTGGCCAGGGTGGCTCTGATATAG

Translation (349 aa):
MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQDPRGYNWYKG
ETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSYTLQVIKLNLMSEEVTGQFSV
HPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLLSVTRNDV
GPYECEIQNPASANFSDPVTLNVLYGPDAPTISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQY
TQKLFIPNITTKNSGSYACHTTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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