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Report for CCDS42013.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42013.1 Public Homo sapiens 15 AQR 24 110 108 CCDS HistoryNCBI Gene:9716Re-query CCDS DB by CCDS ID:42013.1Re-query CCDS DB by GeneID:9716See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42013.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000156471.10 ENSP00000156471.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000156471.10Link to Ensembl Protein Viewer:ENSP00000156471.5Re-query CCDS DB by Nucleotide ID:ENST00000156471Re-query CCDS DB by Protein ID:ENSP00000156471
Original member Current member NCBI NM_014691.3 NP_055506.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014691.3Link to Protein Sequence:NP_055506.1Re-query CCDS DB by Nucleotide ID:NM_014691Re-query CCDS DB by Protein ID:NP_055506Link to BLAST:NP_055506.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055506.1 1485 O60306 1485 100% 0 0

Chromosomal Locations for CCDS 42013.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 34856792 34857106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34860042 34860155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34862867 34863041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34867524 34867609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34870752 34870922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34873828 34873999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34874677 34874864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34875935 34876006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34882502 34882639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34884525 34884734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34886526 34886661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34890215 34890324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34893663 34893773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34896897 34896966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34897559 34897705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34900622 34900863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34904336 34904505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34906545 34906712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34910135 34910313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34915038 34915179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34918258 34918378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34920332 34920434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34927035 34927138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34930258 34930371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34932318 34932434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34934571 34934635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34938737 34938813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34940899 34940999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34942012 34942080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34944288 34944428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34948264 34948384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34952885 34952920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34960774 34960814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34964234 34964290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34969539 34969613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4458 nt):
ATGGCAGCCCCTGCGCAGCCCAAGAAGATCGTGGCCCCTACGGTGTCCCAAATCAATGCGGAGTTCGTGA
CCCAGTTAGCATGTAAATACTGGGCTCCCCACATCAAGAAGAAATCACCTTTTGATATAAAGGTTATTGA
AGATATATATGAAAAAGAGATTGTCAAATCAAGGTTTGCTATTAGAAAGATAATGCTCTTGGAATTTAGC
CAGTATCTTGAAAATTATCTCTGGATGAATTATTCTCCTGAGGTATCTAGCAAGGCCTATTTAATGTCAA
TCTGCTGTATGGTGAATGAGAAGTTTAGAGAAAACGTGCCTGCATGGGAGATTTTTAAGAAGAAGCCAGA
CCACTTCCCATTCTTTTTTAAACACATCTTGAAGGCGGCATTAGCTGAAACTGATGGTGAATTTTCACTT
CATGAACAGACAGTCTTACTACTTTTTCTTGATCATTGCTTCAATAGTTTGGAAGTAGACTTGATACGAA
GTCAAGTACAGCAGCTTATCTCCCTCCCAATGTGGATGGGCTTACAGCTGGCACGATTGGAATTAGAATT
AAAAAAGACACCTAAGCTAAGAAAATTCTGGAACTTGATTAAAAAGAATGATGAAAAGATGGATCCAGAA
GCAAGAGAACAGGCATATCAAGAGAGGAGATTTCTTTCACAACTCATCCAGAAGTTTATCTCTGTGCTGA
AATCAGTCCCACTTTCTGAACCTGTCACTATGGACAAAGTTCATTACTGTGAAAGATTCATTGAACTTAT
GATTGATCTAGAGGCCCTGCTACCCACAAGGCGCTGGTTTAATACCATCCTGGATGATTCCCACCTTCTG
GTTCACTGTTACCTTTCCAATCTTGTTCGTAGAGAAGAGGATGGCCATCTTTTTTCCCAGCTTTTGGACA
TGCTTAAATTCTATACTGGTTTTGAAATTAATGACCAAACTGGAAATGCTCTGACAGAGAATGAGATGAC
CACAATTCACTATGATAGAATTACTTCTCTACAGAGAGCTGCTTTTGCACATTTTCCTGAACTCTATGAT
TTTGCCCTCTCAAATGTGGCAGAAGTAGATACTCGGGAGTCCTTGGTCAAGTTTTTTGGACCTCTTAGTT
CAAACACACTCCACCAGGTGGCATCATACCTCTGCTTGTTGCCAACTCTTCCTAAAAATGAAGACACAAC
TTTTGATAAAGAATTTCTTCTAGAATTGCTGGTATCTCGTCATGAACGTCGAATTTCTCAGATTCAGCAG
TTGAACCAGATGCCTTTGTATCCAACTGAGAAAATTATATGGGATGAAAATATTGTCCCAACTGAGTACT
ATTCTGGAGAAGGTTGTCTTGCTCTTCCCAAATTGAATTTGCAGTTTTTGACTCTTCATGACTACCTGCT
AAGGAACTTTAACCTCTTCCGCTTAGAATCAACTTATGAAATTCGTCAGGACATTGAAGATAGTGTCAGC
AGAATGAAGCCATGGCAATCTGAATATGGCGGTGTAGTGTTTGGTGGTTGGGCGCGAATGGCCCAGCCCA
TTGTGGCTTTCACTGTCGTTGAAGTGGCCAAACCCAACATAGGTGAAAACTGGCCAACCCGAGTTCGTGC
AGATGTTACCATAAATCTCAATGTCAGAGATCACATCAAAGATGAATGGGAAGGTCTTCGTAAGCATGAT
GTATGCTTTTTAATTACCGTACGTCCCACAAAACCTTATGGCACTAAGTTTGACCGGAGGAGACCTTTTA
TTGAGCAGGTTGGCCTGGTTTATGTCAGAGGCTGTGAAATTCAGGGCATGCTGGATGATAAAGGACGTGT
CATTGAAGATGGACCTGAACCCAGACCCAATCTTAGAGGAGAATCAAGGACATTTAGAGTGTTTTTGGAT
CCAAACCAGTATCAACAAGATATGACCAATACTATACAAAATGGAGCAGAGGATGTGTATGAAACTTTTA
ATATAATAATGAGGAGAAAACCAAAGGAAAATAACTTTAAGGCTGTGCTGGAGACTATTCGGAACCTGAT
GAATACTGATTGTGTGGTACCTGACTGGCTGCACGATATCATTTTAGGTTATGGGGACCCAAGTAGTGCA
CATTATTCGAAAATGCCCAATCAGATTGCCACCCTTGATTTCAATGATACATTTCTCTCCATTGAGCATT
TAAAAGCCAGCTTCCCTGGTCATAATGTTAAAGTAACTGTAGAAGACCCTGCTCTACAAATACCCCCTTT
CAGGATAACTTTTCCAGTAAGAAGTGGAAAAGGGAAGAAAAGGAAAGATGCGGATGTGGAAGATGAAGAC
ACCGAGGAAGCAAAAACCTTAATTGTTGAGCCCCATGTTATTCCTAATAGGGGTCCTTATCCTTATAATC
AACCCAAACGTAATACGATTCAGTTCACTCATACACAGATAGAAGCCATCCGTGCTGGAATGCAGCCTGG
GCTGACTATGGTTGTGGGCCCACCTGGTACAGGCAAAACAGATGTGGCAGTTCAGATCATATCCAACATC
TACCACAACTTCCCAGAACAGAGGACTCTAATTGTTACTCATTCCAATCAGGCCCTAAACCAGTTGTTTG
AGAAAATCATGGCATTAGACATTGATGAGCGCCACCTACTGCGTCTTGGTCATGGAGAAGAAGAGCTGGA
GACAGAGAAAGATTTCAGCAGGTATGGAAGAGTTAATTATGTTCTGGCTCGAAGAATAGAACTTTTAGAA
GAAGTCAAACGATTGCAAAAGAGTCTAGGGGTTCCAGGAGATGCCTCATATACCTGTGAAACTGCAGGCT
ATTTCTTCTTATACCAGGTAATGTCTCGCTGGGAAGAGTATATCAGCAAAGTGAAAAATAAAGGTAGTAC
ATTGCCAGATGTTACGGAAGTCTCCACTTTCTTCCCTTTCCATGAATACTTTGCAAATGCTCCTCAACCC
ATTTTTAAAGGAAGATCTTATGAAGAAGACATGGAAATTGCTGAAGGATGTTTCAGGCATATTAAGAAAA
TCTTTACGCAGCTTGAGGAATTCAGAGCCTCTGAATTGCTTCGAAGTGGACTGGACAGATCTAAATACCT
TTTAGTGAAAGAAGCCAAAATTATTGCTATGACCTGTACTCATGCTGCCTTAAAACGACATGACTTGGTC
AAGCTAGGTTTCAAGTATGACAACATTTTGATGGAAGAGGCTGCTCAGATTCTGGAGATAGAAACTTTTA
TCCCTCTTCTTCTACAGAATCCTCAGGATGGATTTAGCCGACTAAAACGATGGATTATGATTGGCGATCA
TCACCAGTTACCTCCAGTTATTAAGAACATGGCCTTTCAAAAGTACTCAAACATGGAGCAGTCTCTCTTC
ACTCGCTTTGTTCGCGTTGGAGTTCCGACTGTTGACCTTGATGCTCAAGGGAGAGCCAGAGCAAGCTTGT
GCAACCTCTACAACTGGCGATACAAGAATCTAGGAAACTTACCCCATGTGCAGCTCTTGCCAGAGTTTAG
TACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGTTGAAGATTTTCAAGGAGTGGGAGAA
TCTGAACCTAATCCTTACTTCTATCAGAATCTTGGAGAGGCAGAATATGTAGTAGCACTTTTTATGTACA
TGTGTTTACTTGGTTACCCTGCTGACAAAATCAGTATTCTAACAACATATAATGGCCAAAAGCATCTTAT
TCGCGACATCATCAATAGACGATGTGGAAACAATCCATTGATTGGAAGACCAAACAAGGTGACAACTGTT
GATAGATTTCAAGGTCAACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
TGAGGGATGTCCGTCGCTTGGTAGTGGCCATGTCTAGAGCCAGACTTGGACTTTATATCTTCGCCAGAGT
ATCCCTCTTCCAAAACTGTTTTGAACTGACTCCAGCTTTCAGTCAGCTCACAGCTCGCCCCCTTCATTTG
CATATAATTCCAACAGAACCTTTCCCAACTACTAGAAAGAATGGAGAGAGACCATCTCATGAAGTACAAA
TAATAAAAAATATGCCCCAGATGGCAAACTTTGTATACAACATGTACATGCATTTGATACAGACTACACA
TCATTATCATCAGACTTTATTACAACTACCACCTGCTATGGTAGAAGAGGGTGAGGAAGTTCAAAATCAA
GAAACAGAATTGGAAACAGAAGAAGAGGCCATGACTGTTCAAGCTGACATCATACCCAGTCCAACAGACA
CCAGCTGCCGTCAAGAAACTCCAGCCTTTCAAACTGACACCACCCCCAGTGAGACAGGAGCCACTTCCAC
TCCAGAAGCCATCCCTGCTTTATCTGAGACCACCCCTACTGTGGTAGGAGCTGTATCTGCACCGGCAGAA
GCTAACACACCTCAGGATGCCACATCTGCCCCGGAAGAGACCAAGTAG

Translation (1485 aa):
MAAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFAIRKIMLLEFS
QYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWEIFKKKPDHFPFFFKHILKAALAETDGEFSL
HEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQLARLELELKKTPKLRKFWNLIKKNDEKMDPE
AREQAYQERRFLSQLIQKFISVLKSVPLSEPVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLL
VHCYLSNLVRREEDGHLFSQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYD
FALSNVAEVDTRESLVKFFGPLSSNTLHQVASYLCLLPTLPKNEDTTFDKEFLLELLVSRHERRISQIQQ
LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVS
RMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGLRKHD
VCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRPNLRGESRTFRVFLD
PNQYQQDMTNTIQNGAEDVYETFNIIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSA
HYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVTVEDPALQIPPFRITFPVRSGKGKKRKDADVEDED
TEEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNI
YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLE
EVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGSTLPDVTEVSTFFPFHEYFANAPQP
IFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLV
KLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLF
TRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGE
SEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTV
DRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHL
HIIPTEPFPTTRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEEGEEVQNQ
ETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAE
ANTPQDATSAPEETK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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