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Report for CCDS86798.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86798.1 Public Homo sapiens 19 PPP2R1A 24 110 108 CCDS HistoryNCBI Gene:5518Re-query CCDS DB by CCDS ID:86798.1Re-query CCDS DB by GeneID:5518See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86798.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000462990.5 ENSP00000470504.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000462990.5Link to Ensembl Protein Viewer:ENSP00000470504.1Re-query CCDS DB by Nucleotide ID:ENST00000462990Re-query CCDS DB by Protein ID:ENSP00000470504
Original member Current member EBI ENST00000703395.1 ENSP00000515286.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703395.1Link to Ensembl Protein Viewer:ENSP00000515286.1Re-query CCDS DB by Nucleotide ID:ENST00000703395Re-query CCDS DB by Protein ID:ENSP00000515286
Original member Current member EBI ENST00000703397.1 ENSP00000515287.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703397.1Link to Ensembl Protein Viewer:ENSP00000515287.1Re-query CCDS DB by Nucleotide ID:ENST00000703397Re-query CCDS DB by Protein ID:ENSP00000515287
Original member Current member EBI ENST00000703423.1 ENSP00000515293.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703423.1Link to Ensembl Protein Viewer:ENSP00000515293.1Re-query CCDS DB by Nucleotide ID:ENST00000703423Re-query CCDS DB by Protein ID:ENSP00000515293
Original member Current member NCBI NM_001363656.2 NP_001350585.1 Accepted alive Link to Nucleotide Sequence:NM_001363656.2Link to Protein Sequence:NP_001350585.1Re-query CCDS DB by Nucleotide ID:NM_001363656Re-query CCDS DB by Protein ID:NP_001350585Link to BLAST:NP_001350585.1

Chromosomal Locations for CCDS 86798.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52212720 52212833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52212955 52213110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52215779 52215893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52216004 52216074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52216529 52216663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52219691 52219864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52220189 52220249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52220979 52221133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52222099 52222241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52225717 52225808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52225965 52225981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1233 nt):
ATGGTGCGGCGGGCCGCAGCCTCCAAGCTGGGGGAGTTTGCCAAGGTGCTGGAGCTGGACAACGTCAAGA
GTGAGATCATCCCCATGTTCTCCAACCTGGCCTCTGACGAGCAGGACTCGGTGCGGCTGCTGGCGGTGGA
GGCGTGCGTGAACATCGCCCAGCTTCTGCCCCAGGAGGATCTGGAGGCCCTGGTGATGCCCACTCTGCGC
CAGGCCGCTGAAGACAAGTCCTGGCGCGTCCGCTACATGGTGGCTGACAAGTTCACAGAGCTCCAGAAAG
CAGTGGGGCCTGAGATCACCAAGACAGACCTGGTCCCTGCCTTCCAGAACCTGATGAAAGACTGTGAGGC
CGAGGTGAGGGCCGCAGCCTCCCACAAGGTCAAAGAGTTCTGTGAAAACCTCTCAGCTGACTGTCGGGAG
AATGTGATCATGTCCCAGATCTTGCCCTGCATCAAGGAGCTGGTGTCCGATGCCAACCAACATGTCAAGT
CTGCCCTGGCCTCAGTCATCATGGGTCTCTCTCCCATCTTGGGCAAAGACAACACCATCGAGCACCTCTT
GCCCCTCTTCCTGGCTCAGCTGAAGGATGAGTGCCCTGAGGTACGGCTGAACATCATCTCTAACCTGGAC
TGTGTGAACGAGGTGATTGGCATCCGGCAGCTGTCCCAGTCCCTGCTCCCTGCCATTGTGGAGCTGGCTG
AGGACGCCAAGTGGCGGGTGCGGCTGGCCATCATTGAGTACATGCCCCTCCTGGCTGGACAGCTGGGAGT
GGAGTTCTTTGATGAGAAACTTAACTCCTTGTGCATGGCCTGGCTTGTGGATCATGTATATGCCATCCGC
GAGGCAGCCACCAGCAACCTGAAGAAGCTAGTGGAAAAGTTTGGGAAGGAGTGGGCCCATGCCACAATCA
TCCCCAAGGTCTTGGCCATGTCCGGAGACCCCAACTACCTGCACCGCATGACTACGCTCTTCTGCATCAA
TGTGCTGTCTGAGGTCTGTGGGCAGGACATCACCACCAAGCACATGCTACCCACGGTTCTGCGCATGGCT
GGGGACCCGGTTGCCAATGTCCGCTTCAATGTGGCCAAGTCTCTGCAGAAGATAGGGCCCATCCTGGACA
ACAGCACCTTGCAGAGTGAAGTCAAGCCCATCCTAGAGAAGCTGACCCAGGACCAGGATGTGGACGTCAA
ATACTTTGCCCAGGAGGCTCTGACTGTTCTGTCTCTCGCCTGA

Translation (410 aa):
MVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLR
QAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRE
NVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLD
CVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIR
EAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMA
GDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVLSLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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