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Report for CCDS33111.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33111.1 Public Homo sapiens 19 HSPBP1 24 110 108 CCDS HistoryNCBI Gene:23640Re-query CCDS DB by CCDS ID:33111.1Re-query CCDS DB by GeneID:23640See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33111.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000255631.9 ENSP00000255631.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000255631.9Link to Ensembl Protein Viewer:ENSP00000255631.4Re-query CCDS DB by Nucleotide ID:ENST00000255631Re-query CCDS DB by Protein ID:ENSP00000255631
Original member Current member EBI ENST00000433386.7 ENSP00000398244.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000433386.7Link to Ensembl Protein Viewer:ENSP00000398244.1Re-query CCDS DB by Nucleotide ID:ENST00000433386Re-query CCDS DB by Protein ID:ENSP00000398244
Original member Current member EBI ENST00000587922.5 ENSP00000467574.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587922.5Link to Ensembl Protein Viewer:ENSP00000467574.1Re-query CCDS DB by Nucleotide ID:ENST00000587922Re-query CCDS DB by Protein ID:ENSP00000467574
Original member Current member NCBI NM_001130106.2 NP_001123578.1 Accepted alive Link to Nucleotide Sequence:NM_001130106.2Link to Protein Sequence:NP_001123578.1Re-query CCDS DB by Nucleotide ID:NM_001130106Re-query CCDS DB by Protein ID:NP_001123578Link to BLAST:NP_001123578.1
Original member Current member NCBI NM_012267.5 NP_036399.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012267.5Link to Protein Sequence:NP_036399.3Re-query CCDS DB by Nucleotide ID:NM_012267Re-query CCDS DB by Protein ID:NP_036399Link to BLAST:NP_036399.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123578.1 359 Q9NZL4-1 359 100% 0 0
NP_036399.3 359 Q9NZL4-1 359 100% 0 0

Chromosomal Locations for CCDS 33111.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55262608 55262682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55265278 55265389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55265886 55265982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55266131 55266286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55274398 55274622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55277642 55277846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55279399 55279608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1080 nt):
ATGTCAGACGAAGGCTCAAGGGGGAGCCGCCTGCCCCTGGCGCTGCCCCCGGCCTCCCAGGGTTGCTCTT
CAGGGGGCGGCGGCGGCGGCTCCTCGGCTGGGGGCTCGGGCAATTCCCGGCCCCCACGCAACCTCCAAGG
CTTGCTGCAGATGGCCATCACCGCGGGCTCTGAAGAGCCAGACCCTCCTCCAGAACCGATGAGTGAGGAG
AGGCGTCAGTGGCTGCAGGAGGCCATGTCGGCTGCCTTCCGAGGCCAGCGGGAGGAGGTGGAGCAGATGA
AGAGCTGCCTCCGAGTGCTGTCACAGCCCATGCCCCCCACTGCTGGGGAGGCCGAGCAGGCGGCCGACCA
GCAAGAGCGAGAGGGGGCCCTGGAGCTGCTGGCCGACCTGTGTGAGAACATGGACAATGCCGCAGACTTC
TGCCAGCTGTCTGGCATGCACCTGCTGGTGGGCCGGTACCTGGAGGCGGGGGCTGCGGGACTGCGGTGGC
GGGCGGCACAGCTCATCGGCACGTGCAGTCAGAACGTGGCAGCCATCCAGGAGCAGGTGCTGGGCCTGGG
TGCCCTGCGTAAGCTGCTGCGGCTGCTGGACCGCGACGCCTGCGACACGGTGCGCGTCAAGGCCCTCTTC
GCCATCTCCTGTCTGGTCCGAGAGCAGGAGGCTGGGCTGCTGCAGTTCCTCCGCCTGGACGGCTTCTCTG
TGTTGATGAGGGCCATGCAGCAGCAGGTGCAGAAGCTCAAGGTCAAATCAGCATTCCTGCTGCAGAACCT
GCTGGTGGGCCACCCTGAACACAAAGGGACCCTGTGCTCCATGGGGATGGTCCAGCAGCTGGTGGCCCTG
GTGCGGACAGAGCACAGCCCCTTCCACGAGCACGTGCTTGGAGCCCTGTGCAGCCTGGTGACAGACTTTC
CGCAGGGTGTGCGCGAGTGTCGGGAGCCGGAACTGGGCCTGGAGGAGCTCCTCCGCCACCGCTGTCAGCT
GCTGCAGCAGCATGAGGAGTACCAGGAGGAGCTGGAGTTCTGTGAAAAGCTGCTACAGACCTGTTTCTCC
AGCCCAGCGGACGACAGCATGGATCGGTGA

Translation (359 aa):
MSDEGSRGSRLPLALPPASQGCSSGGGGGGSSAGGSGNSRPPRNLQGLLQMAITAGSEEPDPPPEPMSEE
RRQWLQEAMSAAFRGQREEVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADF
CQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALF
AISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVAL
VRTEHSPFHEHVLGALCSLVTDFPQGVRECREPELGLEELLRHRCQLLQQHEEYQEELEFCEKLLQTCFS
SPADDSMDR


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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