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Report for CCDS66487.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66487.1 Public Homo sapiens 12 C12orf43 24 110 108 CCDS HistoryNCBI Gene:64897Re-query CCDS DB by CCDS ID:66487.1Re-query CCDS DB by GeneID:64897See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66487.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000539736.5 ENSP00000437803.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539736.5Link to Ensembl Protein Viewer:ENSP00000437803.1Re-query CCDS DB by Nucleotide ID:ENST00000539736Re-query CCDS DB by Protein ID:ENSP00000437803
Original member Current member NCBI NM_001286195.2 NP_001273124.1 Accepted alive Link to Nucleotide Sequence:NM_001286195.2Link to Protein Sequence:NP_001273124.1Re-query CCDS DB by Nucleotide ID:NM_001286195Re-query CCDS DB by Protein ID:NP_001273124Link to BLAST:NP_001273124.1

Chromosomal Locations for CCDS 66487.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 121004153 121004492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121005003 121005060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121006321 121006394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121010828 121010926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121011104 121011146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121016330 121016474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (759 nt):
ATGGCGGCGCCCAGTGGCACAGTGAGCGATTCGGAAAGTAGTAACAGCAGTAGCGATGCGGAGGAGCTGG
AGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAG
AGCCGGTGCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCATAAGGTGAATGAGCATGAA
CAAGATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCCTGC
TGGACAGCTTCATTACCATCTCAGAAGCAGCAAAGGAGCCAGCAAAAGCTAAGGTACAGAAAGTCGCTTT
GGAGGATGATGGCCGTGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCGACAGCCCTCCAGCTCCAGC
AGTGAGGACAGTGACGAGGAGTGGCGGCGGTGCCGGGAGGCAGCTGTGTCGGCGTCCGACATCCTACAGG
AGTCAGCCATCCACAGCCCTGGAACAGTGGAGAAGGAGGCAAAGAAGAAAAGGAAGTTGAAAAAGAAAGC
CAAGAAGGTGGCCAGTGTCGACTCGGCTGTCGCTGCCACCACCCCCACCAGCATGGCCACAGTCCAGAAG
CAGAAGTCAGGTGAGCTCAACGGGGACCAGGTGTCGCTTGGGACCAAAAAGAAGAAAAAGGCAAAGAAGG
CCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGA

Translation (252 aa):
MAAPSGTVSDSESSNSSSDAEELERCREAAMPAWGLEQRPHVAGKPRAGAANSQLSTSQPSLRHKVNEHE
QDGNELQTTPEFRAHVAKKLGALLDSFITISEAAKEPAKAKVQKVALEDDGREKEESPQPRRKRQPSSSS
SEDSDEEWRRCREAAVSASDILQESAIHSPGTVEKEAKKKRKLKKKAKKVASVDSAVAATTPTSMATVQK
QKSGELNGDQVSLGTKKKKKAKKASETSPFPPAKSATAIPAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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