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Report for CCDS76395.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76395.1 Public Homo sapiens 11 COMMD9 24 110 108 CCDS HistoryNCBI Gene:29099Re-query CCDS DB by CCDS ID:76395.1Re-query CCDS DB by GeneID:29099See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76395.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000532705.1 ENSP00000435599.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000532705.1Link to Ensembl Protein Viewer:ENSP00000435599.1Re-query CCDS DB by Nucleotide ID:ENST00000532705Re-query CCDS DB by Protein ID:ENSP00000435599
Original member Current member NCBI NM_001307932.2 NP_001294861.1 Accepted alive Link to Nucleotide Sequence:NM_001307932.2Link to Protein Sequence:NP_001294861.1Re-query CCDS DB by Nucleotide ID:NM_001307932Re-query CCDS DB by Protein ID:NP_001294861Link to BLAST:NP_001294861.1

Chromosomal Locations for CCDS 76395.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 36274636 36274772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 36276137 36276240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 36278477 36278616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 36280712 36280837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 36289362 36289412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGGCTGCCCTGACAGCGGAGCATTTTGCAGCACTCCAGAGCCTGCTCAAGGCCTCCTCGAAAGATGTTG
TCAGACAGCTGTGTCAAGAAAGCTTTTCCAGTTCAGCCCTTGGCTTGAAAAAACTCTTGGATGTTACATG
TTCCAGCTTGTCTGTGACCCAGGAGGAGGCAGAGGAACTGCTCCAGGCTCTGCACCGCCTCACTAGGCTG
GTGGCATTCCGTGACCTGTCCTCTGCCGAGGCAATTCTGGCTCTCTTTCCAGAAAATTTCCACCAAAACC
TCAAAAACCTGCTGACAAAGATCATCCTAGAACATGTTCTCTCTGCCACGCCTGGTCGATCTGGACTGGA
GAGTGGATATCAAAACCTCCTCAGACAGCATCAGCCGCATGGCCGTCCCCACCTGCCTGCTCCAGATGAA
GATCCAAGAAGATCCCAGCCTATGCGGAGACAAACCCTCCATCTCAGCTGTCACCGTGGAGCTGAGCAAA
GAAACACTGGACACCATGTTAGATGGCCTGGGCCGCATCCGAGACCAACTCTCTGCCGTGGCCAGTAA

Translation (185 aa):
MAALTAEHFAALQSLLKASSKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEELLQALHRLTRL
VAFRDLSSAEAILALFPENFHQNLKNLLTKIILEHVLSATPGRSGLESGYQNLLRQHQPHGRPHLPAPDE
DPRRSQPMRRQTLHLSCHRGAEQRNTGHHVRWPGPHPRPTLCRGQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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