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Report for CCDS87501.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87501.1 Public Homo sapiens 7 HUS1 24 110 108 CCDS HistoryNCBI Gene:3364Re-query CCDS DB by CCDS ID:87501.1Re-query CCDS DB by GeneID:3364See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87501.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000458191.5 ENSP00000400727.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000458191.5Link to Ensembl Protein Viewer:ENSP00000400727.1Re-query CCDS DB by Nucleotide ID:ENST00000458191Re-query CCDS DB by Protein ID:ENSP00000400727
Original member Current member EBI ENST00000432325.5 ENSP00000416588.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432325.5Link to Ensembl Protein Viewer:ENSP00000416588.1Re-query CCDS DB by Nucleotide ID:ENST00000432325Re-query CCDS DB by Protein ID:ENSP00000416588
Original member Current member NCBI NM_001363683.2 NP_001350612.1 Accepted alive Link to Nucleotide Sequence:NM_001363683.2Link to Protein Sequence:NP_001350612.1Re-query CCDS DB by Nucleotide ID:NM_001363683Re-query CCDS DB by Protein ID:NP_001350612Link to BLAST:NP_001350612.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350612.1 259 O60921-2 259 100% 0 0

Chromosomal Locations for CCDS 87501.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 47965356 47965438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47967806 47967925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47969219 47969318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47975613 47975687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47976730 47976837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47978417 47978593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47978689 47978805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (780 nt):
ATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAACTTCATCCTTTGTG
ACAAGCTGGCTAATGGAGGAGTGAGCATGTGGTGTGAGCTGGAACAGGAGAACTTCTTCAACGAATTTCA
AATGGAGGGTGTCTCTGCAGAAAACAATGAGATTTATTTAGAGCTAACATCGGAAAACTTATCTCGAGCC
TTGAAGACTGCCCAGAATGCCAGGGCTTTGAAAATCAAACTGACTAATAAACACTTTCCCTGCCTCACGG
TCTCCGTGGAGCTGTTATCTATGTCAAGCAGTAGCCGCATTGTGACCCATGACATCCCCATAAAGGTGAT
TCCTAGGAAATTGTGGAAGGACTTACAAGAACCGGTGGTCCCAGATCCTGATGTTAGTATTTATTTACCA
GTCTTGAAGACTATGAAGAGTGTTGTGGAAAAAATGAAAAACATCAGCAATCACCTTGTTATTGAAGCAA
ACCTAGATGGAGAATTGAATTTGAAAATAGAAACTGAATTAGTATGTGTTACAACTCATTTTAAAGATCT
TGGAAATCCTCCATTAGCCTCTGAAAGCACCCATGAGGACAGAAACGTGGAACACATGGCTGAAGTGCAC
ATAGATATTAGGAAGCTCCTACAGTTTCTTGCTGGACAACAAGTAAATCCCACAAAGGCCTTATGCAATA
TTGTGAATAACAAGATGGTGCATTTTGATCTGCTTCATGAAGACGTGTCCCTTCAGTATTTCATCCCTGC
GCTGTCCTAG

Translation (259 aa):
MIAKLAKTCTLRISPDKLNFILCDKLANGGVSMWCELEQENFFNEFQMEGVSAENNEIYLELTSENLSRA
LKTAQNARALKIKLTNKHFPCLTVSVELLSMSSSSRIVTHDIPIKVIPRKLWKDLQEPVVPDPDVSIYLP
VLKTMKSVVEKMKNISNHLVIEANLDGELNLKIETELVCVTTHFKDLGNPPLASESTHEDRNVEHMAEVH
IDIRKLLQFLAGQQVNPTKALCNIVNNKMVHFDLLHEDVSLQYFIPALS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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