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Report for CCDS46211.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46211.1 Public Homo sapiens 19 ZNF419 24 110 108 CCDS HistoryNCBI Gene:79744Re-query CCDS DB by CCDS ID:46211.1Re-query CCDS DB by GeneID:79744See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46211.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000415379.6 ENSP00000392129.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000415379.6Link to Ensembl Protein Viewer:ENSP00000392129.2Re-query CCDS DB by Nucleotide ID:ENST00000415379Re-query CCDS DB by Protein ID:ENSP00000392129
Original member Current member NCBI NM_001098496.2 NP_001091966.1 Accepted alive Link to Nucleotide Sequence:NM_001098496.2Link to Protein Sequence:NP_001091966.1Re-query CCDS DB by Nucleotide ID:NM_001098496Re-query CCDS DB by Protein ID:NP_001091966Link to BLAST:NP_001091966.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001091966.1 464 Q96HQ0-6 464 100% 0 0

Chromosomal Locations for CCDS 46211.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57487951 57487983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57491471 57491597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57492856 57494090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1395 nt):
ATGGCGGCGGCCGCCCTGAGGGACCCCGCTCAGGGCTATGTGACCTTTGAGGATGTGGCTGTCTACTTCT
CCCAGGAGGAATGGAGATTGCTTGATGACGCTCAGAGGCTCCTCTACCGCAATGTGATGCTGGAGAACTT
TACACTTCTGGCCTCTCTGGGTTGTTGGCATGGAGCCGAGGCTGAGGAGGCTCCTGAGCAGATTGCTTCT
GTAGGACTGCTCAGTTCAAACATTCAGCAACACCAGAAGCAGCACTGTGGAGAGAAACCCTTAAAAAGAC
AAGAGGGCAGGGTCCCAGTTTTGAGGAGTTGCAAAGTTCACCTATCAGAGAAGTCCTTGCAAAGCAGGGA
GGTTGGGAAGGCCCTCCTGATCAGCTCAGGTGTTCTCAAGCACCAGGTGACTCACACAGGAGAGAAGTCA
CATAGGAGCTCCAAAAGTAGGGAGGCCTTTCATGCTGGAAAAAGGCATTACAAATGCAGTGAATGTGGGA
AAGCCTTTGGTCAGAAATATTTACTTGTTCAGCACCAGAGACTACATGCTGGGAAAAAGACGTATGAATG
CAGTGAATGTGGGAAGTTATTTAGAGATATGTCCAACCTTTTTATACACCAAATAGTTCACACTGGAGAA
AGGCCTTACGGGTGTAGTAACTGTGGAAAATCCTTTAGCCGTAATGCTCACCTCATTGAACACCAGAGAG
TTCACACTGGAGAAAAGCCTTTTACATGCAGTGAATGTGGAAAAGCTTTCAGGCATAATTCCACACTTGT
TCAGCATCACAAAATCCACACTGGAGTAAGGCCTTATGAGTGCAGTGAATGTGGAAAATTGTTTAGTTTC
AACTCCAGCCTCATGAAACATCAGAGAATTCACACTGGAGAAAGACCTTATAAGTGCAGTGAATGTGGAA
AATTCTATAGCCACAAGTCCAACCTTATCAAACATTGGCGTGTTCATACTGGAGAAAGGCCTTACAAGTG
CAGCGACTGTGGGAAATTTTTTACCCAATGCTCAAGCCTCATGCAACATCAAAAAGTTCACACTGGAGAA
AAGCCTTTTAAGTGCAATGAATGTGGGAGATTCTTTAGAGAGAATTCCACCCTAGTTAGACATCAGAGGG
TTCACACTGGAGCAAAGCCTTATGAGTGCAGGGAATGTGGGAAATTTTTTAGCCAAAGCTCAACCCTCAT
GCAACATCGAAAAGTTCACATTGGAGAAAAGCCTTTTAAGTGCAATGAATGTGGGAGATTGTTTAGAGAG
AATTCCAGCCTTGTTAAACATCAGAGGGTTCACACTGGAGCAAAGCCTTATGAGTGCAGGGAATGTGGGA
AGTTTTTTCGCCACAACTCCAGTCTTTTTAAACATCGAAGGATTCACACTGGAGAAATGCAGTGA

Translation (464 aa):
MAAAALRDPAQGYVTFEDVAVYFSQEEWRLLDDAQRLLYRNVMLENFTLLASLGCWHGAEAEEAPEQIAS
VGLLSSNIQQHQKQHCGEKPLKRQEGRVPVLRSCKVHLSEKSLQSREVGKALLISSGVLKHQVTHTGEKS
HRSSKSREAFHAGKRHYKCSECGKAFGQKYLLVQHQRLHAGKKTYECSECGKLFRDMSNLFIHQIVHTGE
RPYGCSNCGKSFSRNAHLIEHQRVHTGEKPFTCSECGKAFRHNSTLVQHHKIHTGVRPYECSECGKLFSF
NSSLMKHQRIHTGERPYKCSECGKFYSHKSNLIKHWRVHTGERPYKCSDCGKFFTQCSSLMQHQKVHTGE
KPFKCNECGRFFRENSTLVRHQRVHTGAKPYECRECGKFFSQSSTLMQHRKVHIGEKPFKCNECGRLFRE
NSSLVKHQRVHTGAKPYECRECGKFFRHNSSLFKHRRIHTGEMQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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