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Report for CCDS13508.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
13508.2 |
Public |
Homo sapiens |
20 |
DIDO1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:11083](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:13508.2](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:11083](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 20 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 13508.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000395340.5 |
ENSP00000378749.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000395340.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000378749.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000395340](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000378749](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001193370.2 |
NP_001180299.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001193370.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001180299.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001193370](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001180299](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001180299.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_080797.4 |
NP_542987.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_080797.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_542987.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_080797](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_542987](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_542987.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 13508.2
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3570 nt): ATGGACGACAAAGGCGACCCGAGCAATGAGGAGGCACCTAAGGCCATCAAACCCACCAGCAAAGAGTTCA GGAAAACATGGGGTTTTCGAAGGACCACTATCGCCAAGCGAGAGGGCGCAGGGGACGCGGAGGCTGACCC ACTGGAGCCGCCACCCCCACAGCAGCAGCTGGGCCTGTCCCTGCGGCGCAGTGGGAGGCAGCCCAAGCGC ACTGAGCGCGTGGAGCAGTTCCTGACCATTGCGCGGCGCCGCGGCAGGAGGAGCATGCCTGTCTCCCTGG AGGATTCTGGTGAGCCCACGTCCTGCCCCGCCACAGACGCCGAGACAGCCTCCGAGGGCAGCGTGGAAAG CGCTTCTGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGGAACGACCAGCCTCTTCTGAA AAGGTGAAAGGAGGGGATGACCACGATGACACCTCCGATAGTGACAGCGATGGCCTGACCTTGAAAGAGC TTCAGAATCGCCTTCGCAGGAAGCGGGAACAGGAGCCCACTGAGAGGCCCCTGAAAGGGATCCAGAGTCG CCTGCGGAAGAAGCGCCGGGAGGAGGGTCCCGCCGAGACTGTGGGCTCCGAGGCCAGTGACACTGTGGAG GGCGTCCTGCCCAGTAAGCAGGAGCCCGAGAACGATCAGGGGGTTGTGTCCCAGGCTGGGAAAGATGACA GAGAGAGTAAGTTGGAGGGAAAGGCGGCTCAGGACATCAAAGATGAGGAGCCTGGAGACTTGGGCCGACC GAAGCCTGAATGTGAGGGTTACGACCCCAACGCCCTGTATTGCATTTGCCGCCAGCCTCACAACAACAGG TTTATGATTTGCTGTGACCGCTGTGAAGAATGGTTTCATGGCGATTGTGTGGGCATTTCTGAGGCTCGAG GGAGGCTTTTGGAAAGGAATGGGGAAGACTATATCTGCCCAAACTGCACCATTCTGCAAGTGCAGGATGA GACTCATTCAGAAACGGCAGATCAGCAGGAAGCTAAATGGAGACCTGGAGATGCTGATGGCACCGATTGT ACAAGTATAGGAACAATAGAGCAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAGAATTGAGAAAGCTG CAAATCCAAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTGTGATAGAGGCGCCTGGTGCCTCAAAATG TATTGGCCCCGGGTGCTGTCACGTGGCGCAGCCCGACTCGGTGTACTGCAGTAATGACTGTATCCTCAAA CACGCCGCAGCGACAATGAAGTTTCTAAGCTCAGGTAAAGAACAGAAGCCAAAGCCTAAAGAAAAGATGA AGATGAAGCCAGAGAAGCCCAGTCTTCCGAAATGCGGTGCTCAGGCAGGTATTAAAATCTCTTCTGTGCA CAAGAGACCAGCTCCAGAAAAAAAAGAGACCACAGTGAAGAAGGCAGTGGTGGTCCCTGCGCGGAGTGAA GCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGAGCGATCACAATTACAATGCAG TAAAGCCAGAAAAGACTGCTGCTCCCTCGCCGTCACTGTTGTATAAATCCACGAAGGAAGACAGGAGGTC CGAGGAGAAAGCGGCAGCCATGGCAGCCTCAAAGAAAACAGCCCCTCCAGGCTCCGCGGTGGGCAAGCAG CCTGCACCTAGAAACCTCGTGCCAAAGAAGTCTTCTTTTGCTAATGTGGCAGCAGCCACACCAGCCATTA AAAAGCCACCCTCAGGTTTCAAGGGCACCATCCCCAAGAGGCCATGGCTCTCCGCTACCCCATCGAGTGG TGCTTCAGCTGCCAGGCAGGCCGGACCGGCACCTGCAGCGGCAACGGCTGCCTCCAAGAAGTTCCCTGGC TCCGCTGCTTTGGTGGGAGCCGTAAGGAAGCCAGTGGTACCTTCTGTTCCAATGGCCTCGCCAGCCCCAG GACGCCTTGGGGCTATGAGTGCTGCACCATCGCAGCCAAATTCACAAATTCGGCAAAATATCAGACGCTC CTTAAAAGAGATTTTGTGGAAAAGAGTCAATGACAGCGATGACTTAATCATGACAGAAAACGAAGTAGGA AAAATTGCCCTCCATATTGAGAAGGAGATGTTTAACTTGTTTCAAGTTACAGATAATCGCTACAAGAGTA AATATCGCAGCATCATGTTCAACCTGAAGGACCCTAAAAATCAGGGACTCTTCCATCGTGTTCTGCGTGA GGAAATCTCTTTGGCGAAACTTGTGAGACTGAAGCCAGAAGAACTTGTATCTAAAGAGCTTTCCACGTGG AAAGAGAGGCCAGCGAGATCTGTGATGGAGTCCAGAACTAAACTGCACAATGAAAGCAAGAAGACGGCCC CCAGGCAGGAGGCCATCCCCGATCTGGAGGACTCTCCGCCAGTGTCGGATTCAGAGGAACAGCAAGAGTC AGCACGTGCTGTCCCTGAGAAGAGCACAGCGCCGCTTCTCGACGTCTTCAGCAGCATGTTGAAAGACACC ACCAGTCAGCACCGCGCACACCTCTTCGATCTCAACTGTAAAATTTGCACAGGCCAGGTTCCCTCCGCAG AAGATGAGCCAGCTCCGAAAAAACAAAAATTGTCAGCTTCTGTTAAGAAAGAAGACTTAAAATCAAAGCA TGACAGCTCTGCACCTGACCCAGCTCCGGATTCAGCTGATGAGGTGATGCCGGAGGCTGTGCCTGAAGTT GCCTCTGAGCCAGGCCTAGAAAGTGCTTCTCATCCAAATGTGGACAGAACGTATTTCCCTGGGCCTCCAG GAGATGGCCATCCCGAGCCCTCCCCGCTGGAAGACCTGTCCCCCTGCCCAGCCTCCTGTGGGAGCGGGGT GGTCACCACCGTCACAGTGTCCGGCCGGGACCCCAGGACCGCTCCAAGCAGTTCATGCACAGCCGTGGCC TCCGCAGCATCCCGCCCAGACAGCACCCACATGGTGGAAGCCAGACAGGATGTGCCGAAGCCTGTCTTGA CTTCTGTGATGGTGCCCAAGTCCATACTAGCTAAGCCATCCTCATCTCCTGACCCAAGATACCTGTCAGT TCCTCCGTCACCAAATATCAGCACTTCAGAATCACGTTCCCCTCCAGAGGGAGACACGACCCTCTTTTTG TCTCGACTCAGCACCATTTGGAAAGGATTTATTAACATGCAGAGTGTGGCAAAATTTGTCACTAAGGCGT ATCCTGTCTCTGGGTGTTTTGATTACCTCAGTGAGGATTTGCCTGACACAATTCACATTGGTGGGAGGAT CGCACCGAAGACAGTTTGGGATTATGTTGGCAAACTCAAGTCTTCTGTGTCTAAGGAGCTCTGTCTGATC CGCTTCCACCCCGCCACAGAGGAAGAGGAGGTCGCCTATATCTCTCTCTACTCCTATTTCAGCAGCCGTG GCCGCTTTGGTGTTGTAGCTAATAACAACAGGCACGTCAAGGACCTCTACCTGATCCCGCTGAGCGCCCA GGACCCTGTTCCATCCAAACTCTTGCCCTTTGAGGGACCAGGTAAGCGCCGGCTTTCTGGGTGGAGGTGA
Translation (1189 aa): MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLSLRRSGRQPKR TERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASETRSGPQSASTAVKERPASSE KVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERPLKGIQSRLRKKRREEGPAETVGSEASDTVE GVLPSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNR FMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDC TSIGTIEQKSSEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVKKAVVVPARSE ALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKSTKEDRRSEEKAAAMAASKKTAPPGSAVGKQ PAPRNLVPKKSSFANVAAATPAIKKPPSGFKGTIPKRPWLSATPSSGASAARQAGPAPAAATAASKKFPG SAALVGAVRKPVVPSVPMASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG KIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW KERPARSVMESRTKLHNESKKTAPRQEAIPDLEDSPPVSDSEEQQESARAVPEKSTAPLLDVFSSMLKDT TSQHRAHLFDLNCKICTGQVPSAEDEPAPKKQKLSASVKKEDLKSKHDSSAPDPAPDSADEVMPEAVPEV ASEPGLESASHPNVDRTYFPGPPGDGHPEPSPLEDLSPCPASCGSGVVTTVTVSGRDPRTAPSSSCTAVA SAASRPDSTHMVEARQDVPKPVLTSVMVPKSILAKPSSSPDPRYLSVPPSPNISTSESRSPPEGDTTLFL SRLSTIWKGFINMQSVAKFVTKAYPVSGCFDYLSEDLPDTIHIGGRIAPKTVWDYVGKLKSSVSKELCLI RFHPATEEEEVAYISLYSYFSSRGRFGVVANNNRHVKDLYLIPLSAQDPVPSKLLPFEGPGKRRLSGWR
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