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Report for CCDS2282.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2282.1 Public Homo sapiens 2 UBE2E3 24 110 108 CCDS HistoryNCBI Gene:10477Re-query CCDS DB by CCDS ID:2282.1Re-query CCDS DB by GeneID:10477See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2282.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392415.6 ENSP00000376215.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392415.6Link to Ensembl Protein Viewer:ENSP00000376215.2Re-query CCDS DB by Nucleotide ID:ENST00000392415Re-query CCDS DB by Protein ID:ENSP00000376215
Original member Current member EBI ENST00000410062.9 ENSP00000386788.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000410062.9Link to Ensembl Protein Viewer:ENSP00000386788.3Re-query CCDS DB by Nucleotide ID:ENST00000410062Re-query CCDS DB by Protein ID:ENSP00000386788
Original member Current member EBI ENST00000602710.5 ENSP00000473623.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000602710.5Link to Ensembl Protein Viewer:ENSP00000473623.1Re-query CCDS DB by Nucleotide ID:ENST00000602710Re-query CCDS DB by Protein ID:ENSP00000473623
Original member Current member EBI ENST00000602959.5 ENSP00000473639.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000602959.5Link to Ensembl Protein Viewer:ENSP00000473639.1Re-query CCDS DB by Nucleotide ID:ENST00000602959Re-query CCDS DB by Protein ID:ENSP00000473639
Original member Current member NCBI NM_001278554.2 NP_001265483.1 Accepted alive Link to Nucleotide Sequence:NM_001278554.2Link to Protein Sequence:NP_001265483.1Re-query CCDS DB by Nucleotide ID:NM_001278554Re-query CCDS DB by Protein ID:NP_001265483Link to BLAST:NP_001265483.1
Original member Current member NCBI NM_001278555.2 NP_001265484.1 Accepted alive Link to Nucleotide Sequence:NM_001278555.2Link to Protein Sequence:NP_001265484.1Re-query CCDS DB by Nucleotide ID:NM_001278555Re-query CCDS DB by Protein ID:NP_001265484Link to BLAST:NP_001265484.1
Original member Current member NCBI NM_006357.4 NP_006348.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006357.4Link to Protein Sequence:NP_006348.1Re-query CCDS DB by Nucleotide ID:NM_006357Re-query CCDS DB by Protein ID:NP_006348Link to BLAST:NP_006348.1
Original member Current member NCBI NM_182678.3 NP_872619.1 Accepted alive Link to Nucleotide Sequence:NM_182678.3Link to Protein Sequence:NP_872619.1Re-query CCDS DB by Nucleotide ID:NM_182678Re-query CCDS DB by Protein ID:NP_872619Link to BLAST:NP_872619.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265483.1 207 Q969T4 207 100% 0 0
NP_001265484.1 207 Q969T4 207 100% 0 0
NP_006348.1 207 Q969T4 207 100% 0 0
NP_872619.1 207 Q969T4 207 100% 0 0

Chromosomal Locations for CCDS 2282.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 180982043 180982236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 180984043 180984093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181057693 181057825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181060665 181060812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181062791 181062888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGTCCAGTGATAGGCAAAGGTCCGATGATGAGAGCCCCAGCACCAGCAGTGGCAGTTCAGATGCGGACC
AGCGAGACCCAGCCGCTCCAGAGCCTGAAGAACAAGAGGAAAGAAAACCTTCTGCCACCCAGCAGAAGAA
AAACACCAAACTCTCTAGCAAAACCACTGCTAAGTTATCCACTAGTGCTAAAAGAATTCAGAAGGAGCTA
GCTGAAATAACCCTTGATCCTCCTCCTAATTGCAGTGCTGGGCCTAAAGGAGATAACATTTATGAATGGA
GATCAACTATACTTGGTCCACCGGGTTCTGTATATGAAGGTGGTGTGTTTTTTCTGGATATCACATTTTC
ATCAGATTATCCATTTAAGCCACCAAAGGTTACTTTCCGCACCAGAATCTATCACTGCAACATCAACAGT
CAGGGAGTCATCTGTCTGGACATCCTTAAAGACAACTGGAGTCCCGCTTTGACTATTTCAAAGGTTTTGC
TGTCTATTTGTTCCCTTTTGACAGACTGCAACCCTGCGGATCCTCTGGTTGGAAGCATAGCCACTCAGTA
TTTGACCAACAGAGCAGAACACGACAGGATAGCCAGACAGTGGACCAAGAGATACGCAACATAA

Translation (207 aa):
MSSDRQRSDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKEL
AEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINS
QGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYAT


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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