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Report for CCDS33057.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33057.1 Public Homo sapiens 19 IGFL4 24 110 108 CCDS HistoryNCBI Gene:444882Re-query CCDS DB by CCDS ID:33057.1Re-query CCDS DB by GeneID:444882See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33057.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377697.2 ENSP00000366926.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377697.2Link to Ensembl Protein Viewer:ENSP00000366926.1Re-query CCDS DB by Nucleotide ID:ENST00000377697Re-query CCDS DB by Protein ID:ENSP00000366926
Original member Current member NCBI NM_001002923.3 NP_001002923.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001002923.3Link to Protein Sequence:NP_001002923.1Re-query CCDS DB by Nucleotide ID:NM_001002923Re-query CCDS DB by Protein ID:NP_001002923Link to BLAST:NP_001002923.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002923.1 124 Q6B9Z1 124 100% 0 0

Chromosomal Locations for CCDS 33057.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 46039892 46039936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46040157 46040416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46040518 46040568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46040944 46040962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (375 nt):
ATGGTGCCCAGAATTTCTGCTGCCATCTTCATTTTTGAACTTTTGGGTTCAAACTCAGAAGGAGTCACAG
ATCTTAGACTGTGGCTATGCCAGCCAGCGCCCAGGTGCGGGGAGTGGACCTACAACCCCTTGGAGCAGTG
CTGTGATGACGGTGTCATCCTAGACTTGAACCAGACCCGGCTCTGCGGCTCCAGCTGCACCTTCTGGCCC
TGCTTCCAGCACTGCTGCCTGGAGTCTTTGGGCTCTCAGAACCAGACAGTTGTGAGGTTCAAGGTCCCAG
GCATGAAGCCAGATTGCAAGTCCTCCCCTATCACCAGGATCTGTGCCCAGGAATACCACCCAAAAAGCCC
TGTGTCAAGATCTGACCTCATCTAG

Translation (124 aa):
MVPRISAAIFIFELLGSNSEGVTDLRLWLCQPAPRCGEWTYNPLEQCCDDGVILDLNQTRLCGSSCTFWP
CFQHCCLESLGSQNQTVVRFKVPGMKPDCKSSPITRICAQEYHPKSPVSRSDLI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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