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Report for CCDS4992.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4992.1 Public Homo sapiens 6 ELOVL4 24 110 108 CCDS HistoryNCBI Gene:6785Re-query CCDS DB by CCDS ID:4992.1Re-query CCDS DB by GeneID:6785See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4992.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369816.5 ENSP00000358831.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369816.5Link to Ensembl Protein Viewer:ENSP00000358831.4Re-query CCDS DB by Nucleotide ID:ENST00000369816Re-query CCDS DB by Protein ID:ENSP00000358831
Original member Current member NCBI NM_022726.4 NP_073563.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022726.4Link to Protein Sequence:NP_073563.1Re-query CCDS DB by Nucleotide ID:NM_022726Re-query CCDS DB by Protein ID:NP_073563Link to BLAST:NP_073563.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073563.1 314 Q9GZR5 314 100% 0 0

Chromosomal Locations for CCDS 4992.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 79916608 79916883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 79919420 79919547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 79921625 79921796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 79924952 79925032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 79926194 79926381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 79947180 79947279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGGGCTCCTGGACTCGGAGCCGGGTAGTGTCCTAAACGTAGTGTCCACGGCACTCAACGACACGGTAG
AGTTCTACCGCTGGACCTGGTCCATCGCAGATAAGCGTGTGGAAAATTGGCCTCTGATGCAGTCTCCTTG
GCCTACACTAAGTATAAGCACTCTTTATCTCCTGTTTGTGTGGCTGGGTCCAAAATGGATGAAGGACCGA
GAACCTTTTCAGATGCGTCTAGTGCTCATTATCTATAATTTTGGGATGGTTTTGCTTAACCTCTTTATCT
TCAGAGAGTTATTCATGGGATCATATAATGCGGGATATAGCTATATTTGCCAGAGTGTGGATTATTCTAA
TAATGTTCATGAAGTCAGGATAGCTGCTGCTCTGTGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTG
GACACAGTGTTTTTTATTCTGAGAAAGAAAAACAACCAAGTTTCTTTCCTTCATGTGTATCATCACTGTA
CGATGTTTACCTTGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACAAGCATTTTTTGGAGCCCAGTT
GAATTCCTTTATCCATGTGATTATGTACTCATACTATGGGTTAACTGCATTTGGCCCATGGATTCAGAAA
TATCTTTGGTGGAAACGATACCTGACTATGTTGCAACTGATTCAATTCCATGTGACCATTGGGCACACGG
CACTGTCTCTTTACACTGACTGCCCCTTCCCCAAATGGATGCACTGGGCTCTAATTGCCTATGCAATCAG
CTTCATATTTCTCTTTCTTAACTTCTACATTCGGACATACAAAGAGCCTAAGAAACCAAAAGCTGGAAAA
ACAGCCATGAATGGTATTTCAGCAAATGGTGTGAGCAAATCAGAAAAACAACTCATGATAGAAAATGGAA
AAAAGCAGAAAAATGGAAAAGCAAAAGGAGATTAA

Translation (314 aa):
MGLLDSEPGSVLNVVSTALNDTVEFYRWTWSIADKRVENWPLMQSPWPTLSISTLYLLFVWLGPKWMKDR
EPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNNVHEVRIAAALWWYFVSKGVEYL
DTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQK
YLWWKRYLTMLQLIQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKKPKAGK
TAMNGISANGVSKSEKQLMIENGKKQKNGKAKGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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