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Report for CCDS1609.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1609.1 Public Homo sapiens 1 GPR137B 24 110 108 CCDS HistoryNCBI Gene:7107Re-query CCDS DB by CCDS ID:1609.1Re-query CCDS DB by GeneID:7107See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1609.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366592.8 ENSP00000355551.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366592.8Link to Ensembl Protein Viewer:ENSP00000355551.3Re-query CCDS DB by Nucleotide ID:ENST00000366592Re-query CCDS DB by Protein ID:ENSP00000355551
Original member Current member NCBI NM_003272.4 NP_003263.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003272.4Link to Protein Sequence:NP_003263.1Re-query CCDS DB by Nucleotide ID:NM_003272Re-query CCDS DB by Protein ID:NP_003263Link to BLAST:NP_003263.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003263.1 399 O60478 399 100% 0 0

Chromosomal Locations for CCDS 1609.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 236142623 236143036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 236168706 236168755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 236178414 236178636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 236179879 236180028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 236183778 236183906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 236205126 236205250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 236208050 236208158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1200 nt):
ATGAGGCCCGAGCGTCCCCGGCCGCGCGGCAGCGCCCCCGGCCCGATGGAGACCCCGCCGTGGGACCCAG
CCCGCAACGACTCGCTGCCGCCCACGCTGACCCCGGCCGTGCCCCCCTACGTGAAGCTTGGCCTCACCGT
CGTCTACACCGTGTTCTACGCGCTGCTCTTCGTGTTCATCTACGTGCAGCTCTGGCTGGTGCTGCGTTAC
CGCCACAAGCGGCTCAGCTACCAGAGCGTCTTCCTCTTTCTCTGCCTCTTCTGGGCCTCCCTGCGGACCG
TCCTCTTCTCCTTCTACTTCAAAGACTTCGTGGCGGCCAATTCGCTCAGCCCCTTCGTCTTCTGGCTGCT
CTACTGCTTCCCTGTGTGCCTGCAGTTTTTCACCCTCACGCTGATGAACTTGTACTTCACGCAGGTGATT
TTCAAAGCCAAGTCAAAATATTCTCCAGAATTACTCAAATACCGGTTGCCCCTCTACCTGGCCTCCCTCT
TCATCAGCCTTGTTTTCCTGTTGGTGAATTTAACCTGTGCTGTGCTGGTAAAGACGGGAAATTGGGAGAG
GAAGGTTATCGTCTCTGTGCGAGTGGCCATTAATGACACGCTCTTCGTGCTGTGTGCCGTCTCTCTCTCC
ATCTGTCTCTACAAAATCTCTAAGATGTCCTTAGCCAACATTTACTTGGAGTCCAAGGGCTCCTCCGTGT
GTCAAGTGACTGCCATCGGTGTCACCGTGATACTGCTTTACACCTCTCGGGCCTGCTACAACCTGTTCAT
CCTGTCATTTTCTCAGAACAAGAGCGTCCATTCCTTTGATTATGACTGGTACAATGTATCAGACCAGGCA
GATTTGAAGAATCAGCTGGGAGATGCTGGATACGTATTATTTGGAGTGGTGTTATTTGTTTGGGAACTCT
TACCTACCACCTTAGTCGTTTATTTCTTCCGAGTTAGAAATCCTACAAAGGACCTTACCAACCCTGGAAT
GGTCCCCAGCCATGGATTCAGTCCCAGATCTTATTTCTTTGACAACCCTCGAAGATATGACAGTGATGAT
GACCTTGCCTGGAACATTGCCCCTCAGGGACTTCAGGGAGGTTTTGCTCCAGATTACTATGATTGGGGAC
AACAAACTAACAGCTTCCTGGCACAAGCAGGAACTTTGCAAGACTCAACTTTGGATCCTGACAAACCAAG
CCTTGGGTAG

Translation (399 aa):
MRPERPRPRGSAPGPMETPPWDPARNDSLPPTLTPAVPPYVKLGLTVVYTVFYALLFVFIYVQLWLVLRY
RHKRLSYQSVFLFLCLFWASLRTVLFSFYFKDFVAANSLSPFVFWLLYCFPVCLQFFTLTLMNLYFTQVI
FKAKSKYSPELLKYRLPLYLASLFISLVFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLFVLCAVSLS
ICLYKISKMSLANIYLESKGSSVCQVTAIGVTVILLYTSRACYNLFILSFSQNKSVHSFDYDWYNVSDQA
DLKNQLGDAGYVLFGVVLFVWELLPTTLVVYFFRVRNPTKDLTNPGMVPSHGFSPRSYFFDNPRRYDSDD
DLAWNIAPQGLQGGFAPDYYDWGQQTNSFLAQAGTLQDSTLDPDKPSLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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