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Report for CCDS32691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32691.1 Public Homo sapiens 17 SEPTIN4 24 110 108 CCDS HistoryNCBI Gene:5414Re-query CCDS DB by CCDS ID:32691.1Re-query CCDS DB by GeneID:5414See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32691.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321691.3 ENSP00000354874.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000321691.3Link to Ensembl Protein Viewer:ENSP00000354874.2Re-query CCDS DB by Nucleotide ID:ENST00000321691Re-query CCDS DB by Protein ID:ENSP00000354874
Original member Current member NCBI NM_001038704.4 NP_001033793.3 Accepted alive Link to Nucleotide Sequence:NM_001038704.4Link to Protein Sequence:NP_001033793.3Re-query CCDS DB by Nucleotide ID:NM_001038704Re-query CCDS DB by Protein ID:NP_001033793Link to BLAST:NP_001033793.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001033793.3 570 O43236-8 570 100% 0 0

Chromosomal Locations for CCDS 32691.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 58541815 58541966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58542626 58544186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1713 nt):
ATGGTCAAGACAAATAAACCTGGGGCCAAGGTAGCGGTTTCAGCACAGAGAGGGTCTGAGGTTACTACTA
ACACATCCCCTCAGCAGGGACATGGGTACGTTCTTGCCTCAAGCCATCGAAGTGCTGCAGTCTCCCTGAA
CCCTTCCCACCGAAGATCAGAAGCTGCACATCCCACCACTCCCCATTCAGCATCAGACTACCCTCGATCT
GTCTCCCTCCAGTCAGGACCTGGACACTATGCAGTACCCACTCCTCGGGGACCCGAGACTGGACCAAGAA
CAGAATCATCCCGCCATTCCTCTCCCCATCTAAAGAGCCAGAAGACTCAGACACTGGCTTCCCATGCTTC
AAGCAGACAATGGAAAGTTAGTCCACCCAGAGAGGAAGCAGCACGAAGAGGCAGTGAGAGCAAGTCAGGG
CGCGAGGTCGGCCATCATGCTTCATCAATCCCAGATGCCAAATCTACTCATCAGTTGAGTTTTCAAGACC
AGAAGAATAACTTACAATCACAAATCTTAGAAGATGACCCACCATCCAAGGTCCAGAACCCCCAAGGAGT
CAGAGTTCCCCGTAGGATTTTGTCTTACCCAAAGGATGAAGCAGTACAAACTGAGCCCATCCAAAGAATT
ACGACTACTAGTGAGATCAGATCTCCAAGGAGTCCCTCTCTCCTAGAGCACGGAAGCAGCTGTGTCTCTG
CAGACTATCAGACAGCCCAGAGAAGGGTCCCTGTAGAAGAATCAGAAACAGGTCCTTACGGTCCAATTCC
TTCAAAACCCAAGGCCTTGTATAGGAATATGAACTTGGACTCATTGCTCAAACTCTCTGTCCTTAAAGAT
TCTGATGGTGTACACCGAGTTTCTGCACGGGTAGACCCTGAGTCTCTTCATAAGTATTCTGCCTATCCTG
AAACCAAGCCCTCCGCAAAGGTCTTAGTATCATCACAGGTGGAGTCCAACGTGAGGACCCCAATCCGAGG
AAACAGCGAGGTTGGCCGCAGGGTCACCATCTCCCCAGGGGTACAGTCAGTAGAGCCAACTCACCATGTG
ACAGTTCCATCAGTGTCTGAGGGCTCCCACAAGTCATCCATGTTTGTTACTCCAGAGCCCATCTATAAAC
AGCAAACCCAAAAACCCCCAGAAATTACTTACATGTCCCAAGGACCTACACCCAGGTATCCAGAACTCTC
GCAAAAGCCCTCCATCCATGCAGAACTGGAACTGACCCCTAGGCCCTTGCCTCCTCGGTCCTTACCTAGG
TACGGACCTGACTCCTCATGGTGGCCCTTGCTGAATCCTGAAGTTGAAACACCCCAAAGCCAGCTGACAA
CACCGGATTTTGAGCCTAAGTGCTCTCCTTCCCTAGATCTTTTATTGTCCGGTTTTAAAATAGACTCTAG
CCCTTTCTGTGAGGATCTGAAGTTCCAGAGAGAGAAGGCAAGCCTATCACCACCATCACCACCAAAGGAG
TTTCCAAGTTGGGCACCACTGAGTGAAGTGCCACAGACCCCCAAGCACACCTGCAAACAACCCATTCAAA
GGTTTACTGCTTTCTTCCTGGATGTCTCTGAGGAAATGTACAATCGTGTCATCTGGTGGCTAAAAGGTCT
GTGCTTTTCCCTCCTATGGGCCCACTGTGGGAGCTTGGGGGATGGGAGGACAGGTGAGGAGTGGCATCTA
TGTATCTACAGAGCTGGGTCGTTTAGGAGATAA

Translation (570 aa):
MVKTNKPGAKVAVSAQRGSEVTTNTSPQQGHGYVLASSHRSAAVSLNPSHRRSEAAHPTTPHSASDYPRS
VSLQSGPGHYAVPTPRGPETGPRTESSRHSSPHLKSQKTQTLASHASSRQWKVSPPREEAARRGSESKSG
REVGHHASSIPDAKSTHQLSFQDQKNNLQSQILEDDPPSKVQNPQGVRVPRRILSYPKDEAVQTEPIQRI
TTTSEIRSPRSPSLLEHGSSCVSADYQTAQRRVPVEESETGPYGPIPSKPKALYRNMNLDSLLKLSVLKD
SDGVHRVSARVDPESLHKYSAYPETKPSAKVLVSSQVESNVRTPIRGNSEVGRRVTISPGVQSVEPTHHV
TVPSVSEGSHKSSMFVTPEPIYKQQTQKPPEITYMSQGPTPRYPELSQKPSIHAELELTPRPLPPRSLPR
YGPDSSWWPLLNPEVETPQSQLTTPDFEPKCSPSLDLLLSGFKIDSSPFCEDLKFQREKASLSPPSPPKE
FPSWAPLSEVPQTPKHTCKQPIQRFTAFFLDVSEEMYNRVIWWLKGLCFSLLWAHCGSLGDGRTGEEWHL
CIYRAGSFRR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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