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Report for CCDS31088.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31088.1 Public Homo sapiens 1 ZNF669 24 110 108 CCDS HistoryNCBI Gene:79862Re-query CCDS DB by CCDS ID:31088.1Re-query CCDS DB by GeneID:79862See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31088.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343381.10 ENSP00000342818.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000343381.10Link to Ensembl Protein Viewer:ENSP00000342818.6Re-query CCDS DB by Nucleotide ID:ENST00000343381Re-query CCDS DB by Protein ID:ENSP00000342818
Original member Current member NCBI NM_024804.3 NP_079080.2 Accepted alive Link to Nucleotide Sequence:NM_024804.3Link to Protein Sequence:NP_079080.2Re-query CCDS DB by Nucleotide ID:NM_024804Re-query CCDS DB by Protein ID:NP_079080Link to BLAST:NP_079080.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079080.2 464 Q96BR6-1 464 100% 0 0

Chromosomal Locations for CCDS 31088.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247100374 247101319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247101731 247101791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247101987 247102113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247103939 247104199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1395 nt):
ATGGTGAGTGGACTGCGCCTGGCTTCCCGAAGTGGAGAAGAGGGCTGGTTGAAACCTGCTGTGGCGCGAC
TCGGGCCTCCACGCCATCGGCTCCGGAACCTGCGGACCGAGTCGCCGTGGCGTAGCCGGGGCTCAGTCCT
CTTCTGTTCAGGGCCGGGCCGGGCGGGGCGGGCAGCGGAACCCCTGCATCCTGTCTGTACCTGCGGGCGC
CACTTCCGCCGGCCGGAGCCCTGTCGGGAACCCCTCGCCTCCCCTATCCAGGACTCGGTGGCTTTTGAGG
ATGTGGCTGTGAACTTTACCCAGGAGGAATGGGCTTTGCTAGATTCTTCTCAGAAGAATCTCTACAGAGA
AGTGATGCAGGAAACCTGCAGGAACCTGGCTTCTGTAGGAAGCCAATGGAAAGACCAGAATATTGAAGAT
CACTTCGAAAAACCTGGGAAAGATATAAGAAATCATATCGTACAGAGACTGTGTGAAAGTAAAGAAGATG
GTCAGTATGGAGAAGTTGTCAGCCAAATTCCAAATCTTGATCTGAACGAGAACATTTCTACTGGATTAAA
ACCATGTGAATGCAGTATTTGTGGAAAAGTCTTTGTACGTCATTCCCTCCTTAATAGGCATATCCTAGCT
CACTCAGGATACAAACCATATGGAGAGAAGCAATATAAATGTGAACAGTGTGGGAAATTCTTCGTTTCTG
TTCCAGGTGTTAGAAGACACATGATAATGCACAGTGGAAATCCAGCTTATAAATGTACGATATGTGGGAA
AGCTTTTTATTTTCTCAATTCAGTTGAAAGACATCAGAGAACTCACACAGGAGAAAAACCCTATAAATGT
AAACAATGTGGTAAAGCATTCACTGTTTCCGGTTCTTGTCTAATACATGAACGAACTCACACTGGAGAGA
AACCCTACGAATGTAAGGAATGTGGGAAAACATTCAGATTTTCTTGTTCTTTTAAGACGCATGAAAGGAC
TCACACTGGAGAAAGACCCTATAAATGTACCAAATGTGATAAAGCCTTCAGCTGTTCCACTTCCCTTCGT
TACCATGGAAGCATTCATACTGGAGAGAGACCCTATGAGTGTAAACAATGTGGCAAAGCCTTTAGTCGTT
TGAGTTCCCTTTGTAACCATAGAAGTACTCATACCGGAGAGAAACCCTATGAATGTAAACAATGTGATCA
AGCCTTCAGTCGCCTCAGTTCCCTTCACCTCCACGAAAGAATTCATACTGGAGAAAAACCCTATGAATGT
AAGAAATGCGGTAAAGCCTACACTCGTTCCAGTCACCTTACTCGCCATGAAAGAAGTCATGATATAGAGG
CTGGGTGTAGTGACTCAGCCTATAATCCCAGCACTTTGGGAGGCCAAGGCGTGTGGATTGCTTGA

Translation (464 aa):
MVSGLRLASRSGEEGWLKPAVARLGPPRHRLRNLRTESPWRSRGSVLFCSGPGRAGRAAEPLHPVCTCGR
HFRRPEPCREPLASPIQDSVAFEDVAVNFTQEEWALLDSSQKNLYREVMQETCRNLASVGSQWKDQNIED
HFEKPGKDIRNHIVQRLCESKEDGQYGEVVSQIPNLDLNENISTGLKPCECSICGKVFVRHSLLNRHILA
HSGYKPYGEKQYKCEQCGKFFVSVPGVRRHMIMHSGNPAYKCTICGKAFYFLNSVERHQRTHTGEKPYKC
KQCGKAFTVSGSCLIHERTHTGEKPYECKECGKTFRFSCSFKTHERTHTGERPYKCTKCDKAFSCSTSLR
YHGSIHTGERPYECKQCGKAFSRLSSLCNHRSTHTGEKPYECKQCDQAFSRLSSLHLHERIHTGEKPYEC
KKCGKAYTRSSHLTRHERSHDIEAGCSDSAYNPSTLGGQGVWIA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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