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Report for CCDS11473.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11473.1 Public Homo sapiens 17 NAGS 24 110 108 CCDS HistoryNCBI Gene:162417Re-query CCDS DB by CCDS ID:11473.1Re-query CCDS DB by GeneID:162417See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11473.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000293404.8 ENSP00000293404.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000293404.8Link to Ensembl Protein Viewer:ENSP00000293404.2Re-query CCDS DB by Nucleotide ID:ENST00000293404Re-query CCDS DB by Protein ID:ENSP00000293404
Original member Current member NCBI NM_153006.3 NP_694551.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153006.3Link to Protein Sequence:NP_694551.1Re-query CCDS DB by Nucleotide ID:NM_153006Re-query CCDS DB by Protein ID:NP_694551Link to BLAST:NP_694551.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694551.1 534 Q8N159 534 100% 0 0

Chromosomal Locations for CCDS 11473.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 44004664 44005089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44005637 44005911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44006024 44006237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44006529 44006709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44007323 44007494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44007591 44007773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44008448 44008601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1605 nt):
ATGGCGACGGCGCTGATGGCTGTGGTTCTGCGGGCAGCTGCTGTAGCCCCGAGGCTGAGAGGCCGGGGAG
GCACTGGGGGCGCCCGAAGGCTGAGCTGTGGCGCGCGGCGGCGGGCGGCGAGGGGCACCAGCCCGGGGCG
CCGGCTCAGCACCGCCTGGTCGCAGCCCCAGCCCCCGCCCGAGGAGTACGCGGGCGCGGACGACGTCTCC
CAGTCGCCCGTCGCCGAGGAGCCGTCGTGGGTGCCGAGTCCCAGGCCCCCGGTGCCCCACGAGTCCCCAG
AGCCTCCTTCGGGCCGCTCGCTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCAGTGCGGGGCCAGCCC
TGGGGAGGCGCGCCACTGGCTCACGCAGTTCCAGACCTGCCATCACTCCGCGGACAAGCCCTTCGCCGTC
ATCGAGGTGGACGAGGAGGTGCTCAAGTGCCAGCAGGGCGTATCCAGTCTGGCCTTTGCCCTGGCCTTCT
TGCAGCGCATGGACATGAAGCCGCTGGTGGTCCTGGGGCTGCCGGCCCCTACGGCTCCCTCGGGCTGTCT
TTCCTTCTGGGAGGCCAAGGCGCAGCTGGCCAAGAGCTGCAAGGTGCTGGTAGACGCGCTTCGACACAAC
GCCGCCGCTGCTGTGCCATTTTTTGGCGGCGGGTCTGTGCTACGCGCTGCCGAGCCGGCTCCCCATGCCA
GCTACGGCGGCATCGTCTCGGTGGAGACAGACCTGCTGCAGTGGTGCCTGGAGTCGGGCAGCATCCCCAT
CCTGTGCCCCATCGGGGAGACGGCCGCGCGCCGCTCCGTGCTTCTCGACTCCCTGGAGGTGACCGCGTCG
CTGGCCAAGGCGCTGCGGCCCACCAAAATCATCTTCCTCAATAACACAGGCGGCCTGCGCGACAGCAGTC
ATAAGGTCCTGAGTAACGTGAACCTGCCCGCCGACCTGGACCTGGTGTGCAACGCCGAGTGGGTGAGCAC
AAAAGAACGGCAGCAGATGCGGCTCATCGTGGACGTGCTCAGCCGCCTGCCCCACCACTCCTCGGCCGTC
ATCACCGCCGCTAGCACGCTGCTCACTGAGCTCTTTAGCAACAAGGGGTCCGGGACCCTGTTCAAGAACG
CCGAGCGAATGCTACGGGTGCGCAGCCTGGACAAGCTGGACCAGGGCCGTCTAGTGGACCTGGTCAACGC
CAGCTTCGGCAAGAAGCTCAGGGACGACTACCTGGCCTCGCTGCGCCCGCGGCTGCACTCCATCTACGTC
TCCGAGGGGTACAACGCCGCCGCCATTCTGACCATGGAGCCCGTCCTGGGGGGCACCCCGTACCTGGACA
AATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGCTCCGGCCAGATGCTGTGGGAGTGCCTGCGGCGGGA
CCTTCAGACACTTTTCTGGCGCTCCCGGGTCACCAACCCCATCAATCCCTGGTACTTCAAACACAGTGAT
GGCAGCTTCTCCAACAAGCAGTGGATCTTCTTCTGGTTTGGCCTGGCTGATATCCGGGACTCCTATGAGT
TGGTCAACCACGCCAAGGGACTGCCAGACTCCTTTCACAAGCCAGCTTCTGACCCAGGCAGCTGA

Translation (534 aa):
MATALMAVVLRAAAVAPRLRGRGGTGGARRLSCGARRRAARGTSPGRRLSTAWSQPQPPPEEYAGADDVS
QSPVAEEPSWVPSPRPPVPHESPEPPSGRSLVQRDIQAFLNQCGASPGEARHWLTQFQTCHHSADKPFAV
IEVDEEVLKCQQGVSSLAFALAFLQRMDMKPLVVLGLPAPTAPSGCLSFWEAKAQLAKSCKVLVDALRHN
AAAAVPFFGGGSVLRAAEPAPHASYGGIVSVETDLLQWCLESGSIPILCPIGETAARRSVLLDSLEVTAS
LAKALRPTKIIFLNNTGGLRDSSHKVLSNVNLPADLDLVCNAEWVSTKERQQMRLIVDVLSRLPHHSSAV
ITAASTLLTELFSNKGSGTLFKNAERMLRVRSLDKLDQGRLVDLVNASFGKKLRDDYLASLRPRLHSIYV
SEGYNAAAILTMEPVLGGTPYLDKFVVSSSRQGQGSGQMLWECLRRDLQTLFWRSRVTNPINPWYFKHSD
GSFSNKQWIFFWFGLADIRDSYELVNHAKGLPDSFHKPASDPGS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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