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Report for CCDS12633.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12633.1 Public Homo sapiens 19 ZNF221 24 110 108 CCDS HistoryNCBI Gene:7638Re-query CCDS DB by CCDS ID:12633.1Re-query CCDS DB by GeneID:7638See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12633.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000251269.9 ENSP00000251269.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000251269.9Link to Ensembl Protein Viewer:ENSP00000251269.4Re-query CCDS DB by Nucleotide ID:ENST00000251269Re-query CCDS DB by Protein ID:ENSP00000251269
Original member Current member EBI ENST00000587682.6 ENSP00000467367.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000587682.6Link to Ensembl Protein Viewer:ENSP00000467367.1Re-query CCDS DB by Nucleotide ID:ENST00000587682Re-query CCDS DB by Protein ID:ENSP00000467367
Original member Current member EBI ENST00000592350.5 ENSP00000467446.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000592350.5Link to Ensembl Protein Viewer:ENSP00000467446.1Re-query CCDS DB by Nucleotide ID:ENST00000592350Re-query CCDS DB by Protein ID:ENSP00000467446
Original member Current member EBI ENST00000622072.1 ENSP00000477876.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622072.1Link to Ensembl Protein Viewer:ENSP00000477876.1Re-query CCDS DB by Nucleotide ID:ENST00000622072Re-query CCDS DB by Protein ID:ENSP00000477876
Original member Current member NCBI NM_001297588.2 NP_001284517.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001297588.2Link to Protein Sequence:NP_001284517.1Re-query CCDS DB by Nucleotide ID:NM_001297588Re-query CCDS DB by Protein ID:NP_001284517Link to BLAST:NP_001284517.1
Original member Current member NCBI NM_001297589.2 NP_001284518.1 Accepted alive Link to Nucleotide Sequence:NM_001297589.2Link to Protein Sequence:NP_001284518.1Re-query CCDS DB by Nucleotide ID:NM_001297589Re-query CCDS DB by Protein ID:NP_001284518Link to BLAST:NP_001284518.1
Original member Current member NCBI NM_013359.3 NP_037491.2 Accepted alive Link to Nucleotide Sequence:NM_013359.3Link to Protein Sequence:NP_037491.2Re-query CCDS DB by Nucleotide ID:NM_013359Re-query CCDS DB by Protein ID:NP_037491Link to BLAST:NP_037491.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001284517.1 617 Q9UK13 617 100% 0 0
NP_001284518.1 617 Q9UK13 617 100% 0 0
NP_037491.2 617 Q9UK13 617 100% 0 0

Chromosomal Locations for CCDS 12633.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43962727 43962807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43964950 43965076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43965233 43965325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43965804 43967356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1854 nt):
ATGATTTCACCTTCACTTGAACTGCTTCATTCAGGACTCTGCAAATTCCCTGAAGTAGAAGGAAAAATGA
CCACATTCAAAGAGGCAGTGACATTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCT
GGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTAGAGAACTTCAGGAACCTGCTCTCAGTAGGG
AATCAACCATTCCACCAAGATACTTTCCACTTCTTAGGGAAGGAAAAGTTTTGGAAGATGAAGACAACAA
GCCAAAGAGAAGGGAATTCAGGAGGCAAGATCCAAATTGAGATGGAGACTGTTCCAGAAGCAGGACCACA
TGAAGAGTGGTCCTGTCAGCAAATATGGGAACAAATTGCAAGTGACCTAACCAGGTCTCAAAACTCCATA
AGGAACAGCTCTCAGTTCTTCAAAGAAGGTGATGTCCCCTGCCAGATTGAGGCAAGACTATCTATAAGTC
ACGTGCAACAGAAACCTTACCGTTGTAATGAATGTAAACAGTCCTTCAGTGATGTTTCTGTCTTTGATCT
TCATCAACAATCACACTCAGGAGAGAAATCTCATACATGTGGTGAGTGTGGAAAAAGCTTCTGTTACAGC
CCAGCCCTTCATATTCATCAGAGAGTCCATATGGGAGAAAAATGCTATAAGTGTGATGTGTGTGGTAAGG
AATTTAATCAGAGCTCACATCTGCAAACTCATCAGAGAGTCCATACTGGAGAGAAACCATTCAAATGTGG
GCAATGTGGGAAAGGCTTCCATAGTAGATCAGCACTTAATGTTCATTGCAAATTGCACACAGGAGAGAAA
CCTTATAATTGTGAGGAATGTGGGAAAGCCTTCATTCATGATTCACAGCTTCAAGAACATCAGAGAATCC
ATACTGGGGAGAAGCCATTCAAATGTGATATATGTGGTAAGAGCTTCCGTGTTAGATCAAGACTTAATAG
GCATTCCATGGTTCACACAGGAGAAAAACCATTCAGATGTGATACATGTGGCAAGAACTTTCGTCAGAGA
TCAGCACTTAATAGTCATTCCATGGTCCACATAGAAGAGAAGCCATACAAATGTGAGCAATGTGGAAAAG
GCTTCATTTGTAGGCGAGATTTTTGTAAGCATCAGATGGTCCACACAGGAGAGAAACCATATAATTGTAA
AGAATGTGGGAAGACCTTCAGATGGTCCTCATGTCTTTTGAACCATCAGCAAGTCCACAGTGGACAAAAA
TCCTTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACGACGATCTTCCCATCAGAGATCCC
ACAATGGAGAAAAGCCATATAACTGTGAGGAGTGTGGTAAGGACTATAAAAGGAGGTTGGATCTTGAGTT
TCACCAGAGGGTCCACACGGGTGAGAGACCCTATAATTGTAAGGAATGTGGCAAGAGCTTTGGCTGGGCC
TCCTGTCTTTTGAAACATCAGAGACTCCACAGTGGGGAAAAACCTTTCAAATGTGAAGAGTGTGGAAAGA
GATTTACTCAGAGTTCACAACTTCATTCCCATCAGACATGCCATACTGGAGAAAAGCTATACAAATGTGA
GCAGTGTGAGAAGGGGTACAACAGTAAATTTAATCTTGACATGCACCAGAGGGTCCACGGGGGAGAGCGA
CCCTATAATTGTAAGGAATGTGGAAAGAGCTTTGGCTGGGCTTCATGTCTTTTGAAACATCAGAGACTCC
ACAGTGGAGAAAAGCCATTGAAATCTGGAGTGTGGGAAGAGATCTACTCAGAATTCACAGCTTCATTTAC
ATCAGTAAGTCTATGTGGGAGAAAAGCCATATAA

Translation (617 aa):
MISPSLELLHSGLCKFPEVEGKMTTFKEAVTFKDVAVVFTEEELGLLDPAQRKLYRDVMLENFRNLLSVG
NQPFHQDTFHFLGKEKFWKMKTTSQREGNSGGKIQIEMETVPEAGPHEEWSCQQIWEQIASDLTRSQNSI
RNSSQFFKEGDVPCQIEARLSISHVQQKPYRCNECKQSFSDVSVFDLHQQSHSGEKSHTCGECGKSFCYS
PALHIHQRVHMGEKCYKCDVCGKEFNQSSHLQTHQRVHTGEKPFKCGQCGKGFHSRSALNVHCKLHTGEK
PYNCEECGKAFIHDSQLQEHQRIHTGEKPFKCDICGKSFRVRSRLNRHSMVHTGEKPFRCDTCGKNFRQR
SALNSHSMVHIEEKPYKCEQCGKGFICRRDFCKHQMVHTGEKPYNCKECGKTFRWSSCLLNHQQVHSGQK
SFKCEECGKGFYTNSRRSSHQRSHNGEKPYNCEECGKDYKRRLDLEFHQRVHTGERPYNCKECGKSFGWA
SCLLKHQRLHSGEKPFKCEECGKRFTQSSQLHSHQTCHTGEKLYKCEQCEKGYNSKFNLDMHQRVHGGER
PYNCKECGKSFGWASCLLKHQRLHSGEKPLKSGVWEEIYSEFTASFTSVSLCGRKAI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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