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Report for CCDS9784.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9784.1 Public Homo sapiens 14 PIGH 24 110 108 CCDS HistoryNCBI Gene:5283Re-query CCDS DB by CCDS ID:9784.1Re-query CCDS DB by GeneID:5283See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9784.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216452.9 ENSP00000216452.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216452.9Link to Ensembl Protein Viewer:ENSP00000216452.4Re-query CCDS DB by Nucleotide ID:ENST00000216452Re-query CCDS DB by Protein ID:ENSP00000216452
Original member Current member NCBI NM_004569.5 NP_004560.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004569.5Link to Protein Sequence:NP_004560.1Re-query CCDS DB by Nucleotide ID:NM_004569Re-query CCDS DB by Protein ID:NP_004560Link to BLAST:NP_004560.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004560.1 188 Q14442 188 100% 0 0

Chromosomal Locations for CCDS 9784.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 67590080 67590172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67592635 67592718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67593743 67593952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67600024 67600203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (567 nt):
ATGGAGGATGAGCGGAGCTTTTCGGATATCTGCGGCGGCCGCCTGGCGCTGCAGCGCCGCTACTACTCCC
CGTCCTGCCGGGAATTCTGCCTCAGCTGCCCTCGGCTCTCGCTGCGTTCGCTCACCGCTGTCACCTGCAC
GGTGTGGCTGGCGGCCTACGGACTCTTCACCCTCTGCGAGAACAGCATGATCCTCTCTGCTGCCATCTTC
ATCACCCTCTTAGGTCTGCTTGGTTATCTCCATTTTGTGAAGATTGATCAGGAGACTCTGTTAATCATTG
ATTCCCTTGGCATTCAGATGACTTCATCTTATGCTTCAGGCAAAGAAAGCACTACCTTCATAGAAATGGG
CAAGGTCAAGGATATTGTCATCAATGAGGCCATTTACATGCAGAAGGTGATTTACTACCTCTGCATCTTA
TTGAAAGATCCAGTGGAACCACATGGGATATCCCAAGTAGTACCCGTCTTCCAGAGTGCCAAGCCCCGGC
TGGACTGCTTGATTGAAGTATACAGGAGCTGCCAGGAGATCCTGGCACACCAGAAAGCCACATCAACAAG
CCCATGA

Translation (188 aa):
MEDERSFSDICGGRLALQRRYYSPSCREFCLSCPRLSLRSLTAVTCTVWLAAYGLFTLCENSMILSAAIF
ITLLGLLGYLHFVKIDQETLLIIDSLGIQMTSSYASGKESTTFIEMGKVKDIVINEAIYMQKVIYYLCIL
LKDPVEPHGISQVVPVFQSAKPRLDCLIEVYRSCQEILAHQKATSTSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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