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Report for CCDS9780.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9780.1 Public Homo sapiens 14 ATP6V1D 24 110 108 CCDS HistoryNCBI Gene:51382Re-query CCDS DB by CCDS ID:9780.1Re-query CCDS DB by GeneID:51382See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9780.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216442.12 ENSP00000216442.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216442.12Link to Ensembl Protein Viewer:ENSP00000216442.7Re-query CCDS DB by Nucleotide ID:ENST00000216442Re-query CCDS DB by Protein ID:ENSP00000216442
Original member Current member EBI ENST00000554087.5 ENSP00000451167.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554087.5Link to Ensembl Protein Viewer:ENSP00000451167.1Re-query CCDS DB by Nucleotide ID:ENST00000554087Re-query CCDS DB by Protein ID:ENSP00000451167
Original member Current member NCBI NM_015994.4 NP_057078.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015994.4Link to Protein Sequence:NP_057078.1Re-query CCDS DB by Nucleotide ID:NM_015994Re-query CCDS DB by Protein ID:NP_057078Link to BLAST:NP_057078.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057078.1 247 Q9Y5K8 247 100% 0 0

Chromosomal Locations for CCDS 9780.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 67338621 67338762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67340440 67340518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67343372 67343438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67345768 67345871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67347409 67347453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67349037 67349104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67350611 67350690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67352923 67353040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67359658 67359698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGTCGGGCAAAGACCGAATTGAAATCTTTCCCTCGCGAATGGCACAGACCATCATGAAGGCTCGTTTAA
AGGGAGCACAGACAGGTCGAAACCTCCTGAAGAAAAAATCTGATGCCTTAACTCTTCGATTTCGACAGAT
CCTAAAGAAGATAATAGAGACTAAAATGTTGATGGGCGAAGTGATGAGAGAAGCTGCCTTTTCACTAGCT
GAAGCCAAGTTCACAGCAGGTGACTTCAGCACTACAGTTATCCAAAATGTCAATAAAGCGCAAGTGAAGA
TTCGAGCGAAGAAAGATAATGTAGCAGGTGTTACTTTGCCAGTATTTGAACATTACCATGAAGGAACTGA
CAGTTATGAACTGACTGGTTTAGCCAGAGGTGGGGAACAGTTGGCTAAATTAAAGAGGAATTATGCCAAA
GCAGTGGAACTACTGGTGGAACTAGCTTCTCTGCAGACTTCTTTTGTTACTTTGGATGAAGCTATTAAGA
TAACCAACAGGCGTGTAAATGCCATTGAACATGTCATCATTCCCCGGATTGAACGTACTCTTGCTTATAT
CATCACAGAGCTGGATGAGAGAGAGCGAGAAGAGTTCTATAGGTTAAAGAAAATACAAGAGAAGAAAAAG
ATTCTAAAGGAAAAATCTGAGAAGGACTTGGAGCAAAGGAGAGCAGCTGGAGAGGTGTTGGAGCCTGCTA
ATCTTCTGGCTGAAGAGAAGGACGAGGATCTTCTATTTGAATAA

Translation (247 aa):
MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLA
EAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAK
AVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLKKIQEKKK
ILKEKSEKDLEQRRAAGEVLEPANLLAEEKDEDLLFE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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