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Report for CCDS16430.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16430.1 Public Mus musculus 2 Arfgap2 23 108 98 CCDS HistoryNCBI Gene:77038Re-query CCDS DB by CCDS ID:16430.1Re-query CCDS DB by GeneID:77038See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16430.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000080008.12 ENSMUSP00000078920.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080008.12Link to Ensembl Protein Viewer:ENSMUSP00000078920.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000080008Re-query CCDS DB by Protein ID:ENSMUSP00000078920
Original member Current member NCBI NM_023854.2 NP_076343.2 Accepted alive Link to Nucleotide Sequence:NM_023854.2Link to Protein Sequence:NP_076343.2Re-query CCDS DB by Nucleotide ID:NM_023854Re-query CCDS DB by Protein ID:NP_076343Link to BLAST:NP_076343.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076343.2 520 Q99K28-1 520 100% 0 0

Chromosomal Locations for CCDS 16430.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 91265333 91265404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91265572 91265690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91266226 91266298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91267125 91267256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91267336 91267416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91268157 91268238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91268452 91268508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91269452 91269504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91269933 91270069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91270158 91270289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91273541 91273669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91273753 91273887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91274795 91274921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91275073 91275166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91275276 91275394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91275765 91275785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1563 nt):
ATGGCGGCGAGCCCGAGCAAGACCGAAATCCAGACTATTTTTAAGAGACTTCGCGCAATTCCCACCAACA
AGGCCTGTTTCGATTGTGGCGCCAAGAGTCCTAGTTGGGCCAGCATCACTTACGGTGTATTTTTGTGTAT
TGACTGCTCCGGAGTGCATCGCTCCTTGGGTGTCCATCTCAGCTTTATCAGGTCCACAGAGTTGGATTCG
AACTGGAGCTGGTTGCAGCTGAGGTGTATGCAGGTCGGCGGGAATGCCAATGCGACTGCTTTTTTCCGCC
AACACGGATGTATGGCCAATGATGCTAACACCAAATATACGAGCCGAGCTGCCCAGATGTACCGAGAGAA
GATCCGGCAGTTAGGGAGTGCAGCTCTGACTAGGCATGGTACTGATCTTTGGATAGACAGTATGAACAGT
GCTCCAAGTCACTCTCCAGAGAAGAAAGACTCTGATTTCTTCACAGAACATACTCAGGCCCCTGCTTGGG
ATACAGCAGCCACTGATCCTTCAGGGACTCAGCAACCAGCCCTACCTTCAGAGAGCAGTAGCCTGGCACA
ACCTGAACAAGGCCCTAACACTGATCTGCTCGGAACCTCACCCCAAGCCTCTCTGGAACTGAAAAGCTCC
ATTATTGGCAAGAAGAAGCCAGCAGCCGCTAAGAAAGGGCTGGGTGCCAAGAAAGGCCTGGGAGCTCAGA
AGGTGAGCAACCAGAGCTTTACTGAGATTGAGCGGCAGGCCCAGGTGGCAGAGAAGCTCCGAGAGCAGCA
GGCAGCTGATGCCAAGAAGCAGGCAGAAGAGTCCATGGTTGCCTCCATGCGTCTGGCCTACCAGGAGCTC
CAGATTGATCGCAAGAAGGAGGAGAAAAAGCTCCAGAATCTTGAAGGAAAGAAGCGAGAGCAGGCTGAAA
GGCTGGGCATGGGCTTGGTGTCCCGAAGCTCCATCTCCCATTCTGTGCTGTCTGAGATGCAGATGATTGA
GCAGGAAACCCCGCTGAGTGCGAAATCTTCCCGTTCACAGCTTGACTTGTTTGATGATGTTGGAACATTT
GCATCTGGACCCCCAAAGTACAAGGACAACCCCTTTTCCTTGGGAGAAACTTTTGGTTCCCGCTGGGATT
CAGATGCAGCCTGGGGTATGGACAGGGTAGAAGAGAAGGAACCTGAAGTTACCATCTCCAGCATCCGGCC
TATTTCAGAAAGAACTGCGAGTCGGAGGGAAGTGGAGACTCGGAGCTCAGGCCTTGAGTCCAGTGAAGCA
CGGCAGAAGTTTGCAGGAGCCAAAGCCATCTCGTCCGACATGTTCTTTGGTCGTGAGGTGGATTCTGAGT
ATGAAGCTAGGTCTCGGTTACAGCAGCTTTCGGGCAGCAGTGCCATCAGCTCTTCAGACCTTTTTGGAAA
CATGGATGGAGCTCATGGAGGAGGAACTGTATCTCTGGGGAATGTACTTCCTACAGCTGACATTGCCCAG
TTTAAGCAGGGTGTCAAGTCTGTGGCTGGCAAGATGGCTGTGCTGGCCAATGGTGTGATGAATTCCTTAC
AGGATCGCTACGGTTCCTACTGA

Translation (520 aa):
MAASPSKTEIQTIFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS
NWSWLQLRCMQVGGNANATAFFRQHGCMANDANTKYTSRAAQMYREKIRQLGSAALTRHGTDLWIDSMNS
APSHSPEKKDSDFFTEHTQAPAWDTAATDPSGTQQPALPSESSSLAQPEQGPNTDLLGTSPQASLELKSS
IIGKKKPAAAKKGLGAKKGLGAQKVSNQSFTEIERQAQVAEKLREQQAADAKKQAEESMVASMRLAYQEL
QIDRKKEEKKLQNLEGKKREQAERLGMGLVSRSSISHSVLSEMQMIEQETPLSAKSSRSQLDLFDDVGTF
ASGPPKYKDNPFSLGETFGSRWDSDAAWGMDRVEEKEPEVTISSIRPISERTASRREVETRSSGLESSEA
RQKFAGAKAISSDMFFGREVDSEYEARSRLQQLSGSSAISSSDLFGNMDGAHGGGTVSLGNVLPTADIAQ
FKQGVKSVAGKMAVLANGVMNSLQDRYGSY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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