CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS17101.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
17101.1 |
Public |
Mus musculus |
2 |
Rnf114 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:81018](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:17101.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:81018](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 2 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 17101.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000078050.6 |
ENSMUSP00000077197.6 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000078050.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000077197.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000078050](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000077197](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000109214.7 |
ENSMUSP00000104837.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000109214.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000104837.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000109214](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000104837](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001360930.1 |
NP_001347859.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001360930.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001347859.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001360930](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001347859](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001347859.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_030743.6 |
NP_109668.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_030743.6](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_109668.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_030743](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_109668](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_109668.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 17101.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (690 nt): ATGGCGGCGGCGCAGCCGGAGTCCCGAGATGGAGCCGCGCAGTCGGCGAAGCCGGCGTCCGAGACGGACC CCCTCAGCCGCTTTACGTGTCCCGTGTGCCTGGAAGTATTCGAGAAGCCGGTGCAGGTGCCCTGCGGACA CGTCTTTTGCTCTGCATGCCTGCAGGAATGTCTGAAGCCGAAGAAACCTGTCTGTGGGGTGTGTCGCAGC GCTCTGGCACCTGGCGTCCGAGCTGTGGAGCTCGAGCGGCAGATCGAGAGCATAGAGACTTCTTGCCATG GCTGCCGTAAGAATTTCATCCTATCTAAGATCCGGGCCCATGTGACGTCATGTTCCAAATACCAGAATTA CATCATGGAAGGTGTAAAGGCCACCACCAAGGATGCATCCCTTCAGCCGAGAAACATCCCAAACCGATAC ACCTTTCCTTGTCCTTACTGTCCCGAGAAGAACTTTGATCAGGAAGGACTCGTGGAGCACTGCAAACTCA CTCACAGCACCGATACCAAGTCTGTGGTTTGTCCCATCTGTGCCTCGATGCCCTGGGGAGACCCCAGCTA CCGCAGTGCCAACTTCATGGAGCATATCCAACGCCGTCACCGCTTTTCCTACGACACTTTTGTGGATTAC GATGTTGATGAAGATGACATGATAAACCAGGTGTTGCAGCGCTCCATCATTGACCAATGA
Translation (229 aa): MAAAQPESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRS ALAPGVRAVELERQIESIETSCHGCRKNFILSKIRAHVTSCSKYQNYIMEGVKATTKDASLQPRNIPNRY TFPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICASMPWGDPSYRSANFMEHIQRRHRFSYDTFVDY DVDEDDMINQVLQRSIIDQ
|